KEGG   Nannochloropsis gaditana: NGA_0441600
Entry
NGA_0441600       CDS       T02917                                 
Symbol
RBX1
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd03420  Nucleotide excision repair
ngd04120  Ubiquitin mediated proteolysis
ngd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    NGA_0441600 (RBX1)
   04120 Ubiquitin mediated proteolysis
    NGA_0441600 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    NGA_0441600 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ngd04121]
    NGA_0441600 (RBX1)
   03400 DNA repair and recombination proteins [BR:ngd03400]
    NGA_0441600 (RBX1)
Enzymes [BR:ngd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     NGA_0441600 (RBX1)
Ubiquitin system [BR:ngd04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   NGA_0441600 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     NGA_0441600 (RBX1)
   Cul2 complex
     NGA_0441600 (RBX1)
   Cul3 complex
     NGA_0441600 (RBX1)
   Cul4 complex
     NGA_0441600 (RBX1)
   Cul7 complex
     NGA_0441600 (RBX1)
   Cul8 complex
     NGA_0441600 (RBX1)
   Cul9 complex
     NGA_0441600 (RBX1)
DNA repair and recombination proteins [BR:ngd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      NGA_0441600 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      NGA_0441600 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-RING_2 zf-ANAPC11 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-C3H2C3 zf-Nse Prok-RING_4 zf-C3HC4_4 RINGv
Other DBs
NCBI-GeneID: 17360500
NCBI-ProteinID: XP_005853728
LinkDB
Position
Unknown
AA seq 86 aa
MWSWDICADTCAICRNNLNEPSIEYQANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKAR
SVCPLCNKEWEFSKIERIPGYNALGI
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtggtcctgggatatctgcgccgacacctgtgccatttgtagaaacaatctgaacgag
ccctccatcgaataccaggccaacccgtctcccaacaatgaaaatggactttccatcgct
ttcggttgctgctcccacgtcttccatctcgattgcatccagcgctggttgaaagctcgc
tcagtctgtccgttgtgcaataaagagtgggaatttagcaagattgagcgcattccggga
tacaatgccttgggtatataa

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