Novosphingobium ginsenosidimutans: FRF71_01380
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Entry
FRF71_01380 CDS
T06189
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00300
Lysine biosynthesis
ngf00550
Peptidoglycan biosynthesis
ngf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRF71_01380
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FRF71_01380
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
FRF71_01380
Enzymes [BR:
ngf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FRF71_01380
Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
Precursor biosynthesis
Amino acid ligase
FRF71_01380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QEA14889
UniProt:
A0A5B8RZP4
LinkDB
All DBs
Position
complement(294495..295946)
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AA seq
483 aa
AA seq
DB search
MKLARLAELAGIPLANAAEAQVTGFAIDNRKVAPGTVFGAFQGAAVNGEDFIPAAVTAGA
VAVVARPEAKVEGAVHIAADNPRQVFAQLAAQFFTPVPATLVAVTGTNGKTSTVEMTRQI
WRMAGHRAASIGTLGVTTADESISTGLTTPDIVTFLANMSGLAREGVTHVAYEASSHGLS
QYRNEGLVVAAGGFTNLSRDHLDYHKTMEDYFAAKMRLFDEVVADEGAAVIWADDQWSER
ALAHASKRGLNLFTVGEKGEGIRLVSRTPGQLGQLLELVHAGQTWKVNLPLIGAYQAANA
LVSAGLVLTTGGDAAQVFDALARLQPVRGRLERAAISRAGAPVYVDYAHTPDALEAAIAA
LRPHCSGRLIVVFGAGGDRDQGKRPEMGRIAAEQADLGIVTDDNPRSEEPAAIRAAILEG
GAGKLQEVGDRRAAIAAGITAAGRDDIVLVAGKGHEQGQIIGAGESMRVLPFDDVTVARE
CAA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcgcggctggcagagcttgccggcattcccctcgccaacgcagcagaagcg
caggtcaccggcttcgcgatcgacaaccgcaaggttgcccccggcaccgtgtttggggcc
ttccagggcgctgccgttaacggtgaggactttatcccagccgccgtcactgcgggcgcc
gtggctgttgtcgcccggcccgaagccaaagtggaaggtgcggtccacattgcggccgac
aatccgcgtcaggttttcgcgcagttggccgcgcagttctttaccccagttccggccacg
ctggttgcggtgaccgggaccaacggcaaaacctccacggtcgaaatgacccggcagatc
tggcgtatggccgggcaccgtgctgcctcgatcggcacgctgggcgtcaccactgcggac
gagagcatttcgaccgggctgactacgcccgacattgtcaccttcctcgccaacatgagc
gggctggcgcgcgaaggcgtgacgcatgtcgcttacgaagcgtcgagccacggcctctcg
cagtatcgcaacgaagggctggtcgtcgccgccggcggcttcaccaacctcagccgcgat
cacctcgattaccacaagaccatggaagactacttcgcggccaagatgcggctgttcgac
gaagtggtcgccgatgaaggcgcagcggtgatctgggctgacgaccagtggtcggagcgc
gcgctggcacatgccagcaagcgtgggttgaacctgttcacagttggcgagaagggcgag
gggatccggctcgtcagccgcacgccggggcagctcggccagctgctggaactggttcac
gcaggccagacgtggaaggtcaacctgccgctgattggcgcttaccaggccgccaatgca
cttgtttcggccggactggtgctgacgaccggcggcgatgcggcgcaggtgtttgatgcg
ctggcccgcctgcagcccgtccggggccggctggaacgcgccgcgatcagccgcgccggg
gcgccggtctatgttgactatgcccacacgcccgatgcgcttgaggcggcgattgccgcg
ctgcgcccgcattgttcgggtcggctgattgtcgtcttcggagccggcggtgatcgcgat
cagggcaagcgcccggaaatgggccggattgctgccgagcaagccgatctgggcatcgtt
accgacgacaatccccgcagcgaggaaccagcggcgatccgtgccgcgatcctggaaggc
ggggcaggcaagcttcaggaagtgggcgatcgccgggcggcgatagcggcaggaattaca
gcggcggggcgcgatgacatcgtgcttgtggccggcaagggtcatgaacagggacagatc
atcggcgcgggggaatccatgcgcgtgctgcccttcgatgatgttacagtagccagggag
tgtgctgcatga
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