Nannospalax galili (Upper Galilee mountains blind mole rat): 103725573
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Entry
103725573 CDS
T03372
Symbol
Kdm2a
Name
(RefSeq) lysine demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103725573 (Kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103725573 (Kdm2a)
04121 Ubiquitin system [BR:
ngi04121
]
103725573 (Kdm2a)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103725573 (Kdm2a)
Enzymes [BR:
ngi01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103725573 (Kdm2a)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103725573 (Kdm2a)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103725573 (Kdm2a)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103725573 (Kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103725573 (Kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
103725573
NCBI-ProteinID:
XP_008821095
UniProt:
A0A8C6RMQ0
LinkDB
All DBs
Position
Un
AA seq
1161 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYSIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDMELNGLESGNGDEDGADREMRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LAGDSSSDSSRGSQNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELASSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCEEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRPNPRVLMQHC
PARNPQCGDEEGLGGEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMSV
FRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSW
TNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRD
LLTPPTDKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQS
SNLLTAVGSSTRYSLTELNMAGCNKLTDQTLFFLRRIANVTLIDLRGCKQITRKACEHFI
SDLSINSLYCLSDEKLIQKIS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcggtacagccagagattgcgtgggaccatgcgacgg
cgctatgaagatgatggcatctcagatgatgaaattgaagggaaaagaacttttgacttg
gaagagaaactccacaccaacaaatataatgccaattttgttacttttatggagggaaaa
gattttaatgtagagtatatccagcggggtggcttgagagatcctctgattttcaagaat
tctgatggacttggaataaaaatgccagatccggacttcaccgtgaatgatgtcaaaatg
tgtgtggggagtcgtcggatggtagatgtcatggatgtgaacacacaaaaaggcattgaa
atgaccatggctcaatggacacgctactatgagactccagaggaggaacgagagaagctc
tataatgtcatcagcctagaattcagccacacccggctggagaacatggtgcagaggcct
tccacggtggatttcattgactgggtagataacatgtggccaagacatttgaaagaaagt
cagactgagtcaacaaatgccatcttggagatgcagtatcctaaagtacaaaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtaccacatccaccaaggtggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgcagtatatactccaacagacacattagtattcggaggcaattttttg
catagcttcaacatccccatgcaattaaagatatacagcattgaagatcggacacgggtt
ccaaataaattccgctatccattttactacgaaatgtgttggtacgtgttggagcgctat
gtatactgcataaccaaccgttcccacctaaccaaggaatttcagaaagaatccctcagc
atggatatggagttaaatgggttggaatctggaaatggcgacgaggacggggcagaccga
gaaatgcgacgcttgagcagtaggcgctctgtgctcaccagccctgtagctaatggtgtc
aacctggattatgatggtctggggaaaacgtgcagaagtcttccaagtctgaagaaaact
ttggctggagactcatcctcagactctagccggggatcccaaaatggccaagtttgggat
ccccagtgtagtcctcgaaaggacaggcaagtgcatctgacccattttgagcttgaaggt
cttcggtgcctcgtagataaattggagtccctaccactgcacaagaaatgtgttcccaca
gggatagaagatgaagatgctctgattgctgacgtaaagattttgctggaggagcttgcc
agcagtgatcccaagttagctctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccctaccaggccaaaggtgcgagttcccaccatccccataacaaagcct
cacaccatgaagccagctccaaggttaacacctgtgaggcctgcagctgcctcccccatt
gtgtctggagccaggcggagaagagtgcgctgtaggaagtgtaaagcctgtgtgcaagga
gagtgtggtgtttgccactactgccgggacatgaagaaatttggggggcctggacgcatg
aagcagtcctgtgtcctacgacagtgcttggcacccagattgcctcattcagttacatgt
tccctctgtggagaagttgatcagaatgaagagacgcaggacttcgaaaagaaactcatg
gaatgctgtatctgcaatgagatagttcatcctggctgcctccagatggatggagagggg
ttgcttaacgaggaattgccaaattgctgggagtgtccaaagtgttaccaggaagacagc
tcggagaaagcccagaagcggaaaatggaagagagcgatgaagaagctgtgcaagccaaa
gtcctacggcccctgcggagctgcgaggagcccctcacgcccccacctcactcacccact
tccatgctgcagctcatccacgacccggtttccccccggggtatggtgactcggtcatct
cctggggctggccccagcgaccaccacagtgccagccgtgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctacagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccctaacccccgtgtgctaatgcagcactgc
ccagcccgaaacccccagtgtggggatgaggaggggctagggggagaggaggaggaagag
gaggaggaggaggaagatgacagtgcagaggaggggggtgcggccaggctgaatggccgg
ggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtctgtc
ttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtggtat
aaatggtgctgtgacaaaagactctggacaaaaattgacttgagtaggtgtaaggccatt
gtaccccaagctcttagtggcattatcaagaggcagccagtaagcctcgacctcagttgg
accaacatctccaaaaagcagctgacatggctggtcaataggctgcccggactcaaagat
ctcctcctagcaggctgctcctggtctgccgtctctgccctcagcacttccagctgccct
cttctcaggaccctcgatcttcggtgggcagtaggaattaaagaccctcagattcgggac
ttgctgactccaccaactgataaaccaggtcaggacaatcgtagcaagctccggaacatg
actgatttccggttggcaggccttgacatcacggatgccactcttcgactcatcattcgc
cacatgcccctcctgtcaagactcgacctcagtcactgcagccaccttacagaccaatcc
tccaatctgctcactgctgtcggttcttccactcgctactccctcacagagctcaatatg
gcaggttgcaataaattgacagaccagaccctgttcttcctaaggcgtattgctaatgtc
accttgattgaccttcgaggatgcaagcagatcactcgaaaagcctgtgagcacttcatc
tcagacttgtctatcaacagcctctattgcttgtctgatgagaagctgatacagaagatc
agttaa
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integrated database retrieval system
