Nannospalax galili (Upper Galilee mountains blind mole rat): 103730089
Help
Entry
103730089 CDS
T03372
Symbol
Setdb1
Name
(RefSeq) SET domain bifurcated 1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi00310
Lysine degradation
ngi01100
Metabolic pathways
ngi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103730089 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
103730089 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103730089 (Setdb1)
Enzymes [BR:
ngi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
103730089 (Setdb1)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103730089 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103730089 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
Tudor_5
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
103730089
NCBI-ProteinID:
XP_008826488
LinkDB
All DBs
Position
Un
AA seq
1288 aa
AA seq
DB search
MSSLPGCINLDAATAAVESEEIAELQKAVVEELGISMEELRQLIDEELEKMDCIQQRKKQ
LAELETWVLQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYHDSSSDDEAFQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLGQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDSSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMVSSQPIAPPALPDPPLSPQAGDNESLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPASPTLSENVPGGKPGIGQTYRSPLASTPAAPAPAA
PPGVLAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLL
VPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLD
PYVLVDRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINT
GPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYKRLEECLPTGVYEC
NKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKEGYESDVATSSDSSGVDLKDQEDGNSGSEDPEES
NDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKESGLSEVASKDSRPPDLGPPHIPPSI
PVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGDGRAGGGRGETEK
ASTSGLSIKDEGDIKQSKKEDPDDRNKISVVTESARNYGYNPSPMKPEGLRRPPSKTSMH
QSRRLVSSAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEGD
DFEDKKNLSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPIRKNTRQFYDG
EESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattaatttggatgcagcaacagctgcagtggaatctgaa
gagattgcagagctgcaaaaggcagtggttgaagagctgggtatctctatggaagaactt
cggcagctcattgatgaagaactggagaagatggattgtatacagcaacgcaagaagcag
ctagcagagttggagacatgggtgctacagaaagagtctgaagtggctcatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tctaagctgggactacagtatcatgacagtagttctgatgatgaagctttccagcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgcgttaagaaaatca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatctg
cataaaggaaccttgggtcagatgtctggagaactgagcaaagatggtgacctgatagtc
agcatgcggattctgggcaagaagagaactaagacatggcacaagggcacccttattgcc
atccagacagttggactaggaaagaaatacaaggtgaaattcgacaacaaaggaaagagt
ctgctgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaagatggaaatcaggtctggctttatgctggcatt
gtagctgaaacaccaaacgtcaaaaacaagctcaggtttctgattttttttgatgatggc
tacgcttcctatgtcacacagtcagaactatatcccatttgccgaccactgaaaaagact
tgggaggacatagaagacagctcctgccgagatttcatagaggaatatatcactgcctac
ccaaaccgccccatggtactgctcaagagcggccaacttatcaagaccgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgtttggaacccatgttcagt
atgaaaacatcctcagcctctgcactggagaagaagcaaggggggcaactcagaacccgt
ccaaatatgggtgctgtgaggagcaaaggtcctgttgtccaatacacacaggatctaacc
agcactggaacccagttcaaacccatggtatcctcacagcccattgctccaccagcccta
cctgatccacctctgtccccccaggcaggtgacaatgaaagcttggaaagccagcttgct
cagtcacggaagcaggtagccaagaagagtacatcattccggccaggatctgttggctct
ggtcattcctcccctgcatcacccacactcagtgaaaatgttcctggtgggaaacctgga
attggccagacatacagatcacctttggcctcgacaccagctgccccagcacctgcagcc
cctccaggggttctggcccccccagccttccatggcatgctagagcgggccccagctgag
ccctcctaccgcgcccccatggagaagctcttctacttgcctcatgtctgcagctataca
tgtctgtctcgggtcagacctatgaggagtgaacagtaccgaggcaagaaccctctgttg
gtcccattgctgtatgacttccggaggatgacagcccggcgccgagttaaccgcaagatg
ggctttcatgttatctataagacaccttgtggcctctgccttcggacaatgcaagaaatt
gaacgctacctttttgagactggctgtgacttccttttcttggagatgttctgtttggat
ccatatgtgcttgtagacaggaagtttcagccctttaaacctttttactatattttggac
atcacctatggcaaggaagatgttcctctgtcatgtgttaatgagattgacacaactccc
ccaccccaggtggcttacagcaaagagcgcatccctggcaagggtgttttcattaataca
ggccctgaatttctggttggctgtgactgcaaggacgggtgtcgggacaagtccaagtgt
gcctgccatcagctaaccatccaggctacagcctgcaccccagggggccaagtcaaccct
aactctggctaccagtacaagagactagaagagtgtctacccacaggggtttatgagtgt
aacaaacgctgcaaatgtgacccaaacatgtgcacaaatcggttggtacagcatggacta
caggttcgactgcagctgtttaagacgcagaacaagggctggggtattcgctgcttggat
gacatcgccaaaggctcttttgtctgtatttatgcaggaaaaatcctgacagatgacttt
gcagacaaggaaggcctggagatgggggatgagtactttgcaaatctagaccacattgag
agtgtggaaaacttcaaggaaggatatgagagtgatgtcgccacttcctctgacagcagt
ggagtagacctgaaggaccaggaagatggcaacagtggttcagaggaccctgaagaatct
aatgatgacagctcagatgacaacttctgtaaggatgaggactttagcactagctcagtg
tggcgcagctatgccacccggcgccagacccggggtcagaaggagagtggactgtccgag
gtggcttccaaggactcgcgccccccagaccttgggcccccacatatccctccctccatc
cctgtaggaggctgcaatccaccttcctctgaagagacacccaagaacaaggtggcctca
tggctgagctgcaatagtgtcagtgaaggtggttttgctgactctgacagccgatcttca
ttcaagactagtgaaggtggagatggccgggcagggggaggtcgaggggagactgagaaa
gcctccacctcaggattgagcatcaaggatgaaggtgacataaagcagtccaagaaagag
gaccctgatgaccgaaacaagatatcagtagttactgaaagcgctcgtaattatggatac
aatccttctcccatgaagcctgaagggcttcgccgcccacctagtaaaacttctatgcac
cagagccggagactggtgtcttctgcccagtcaaaccctgatgatgtcctgacactgtcc
agcagcacagaaagtgagggggaaagtggaaccagccgaaagcctactgctggtcagact
tcagccacagcagttgacagtgatgatatccagaccatctcttctggctctgaaggcgat
gactttgaggacaagaagaacttgtctggtccaatgaagcgccaggtggcagtaaaatca
acccgaggctttgctcttaaatcaacccatgggattgccattaaatcaaccaacatggct
tccgtggacaagggagagagtgcaccaattcgcaagaacacacgccaattctatgatggt
gaagagtcatgctacatcattgatgccaagcttgaaggcaacttaggccgctacctcaat
catagttgcagccccaacctgtttgtccagaatgtctttgtggatacccatgatcttcgc
ttcccctgggtggccttcttcgccagcaagaggatccgggctggaacagaacttacttgg
gactacaactacgaagtgggcagtgtggaaggcaaagagctgctgtgctgttgtggggcc
atcgagtgcagagggcgtcttctttag
DBGET
integrated database retrieval system
