Nannospalax galili (Upper Galilee mountains blind mole rat): 103736114
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Entry
103736114 CDS
T03372
Symbol
Pcdhga12, Pcdhga6, Pcdhga8
Name
(RefSeq) protocadherin gamma-C4
KO
K16497
protocadherin gamma subfamily C
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103736114 (Pcdhga12)
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103736114 (Pcdhga12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
103736114
NCBI-ProteinID:
XP_017654274
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All DBs
Position
Un
AA seq
944 aa
AA seq
DB search
MGSMASPQLAGKWQVLYMLSLCCCGWVSGQLHYSVVEESELGTLVGNVAQDLGLKVTDLL
SRRLRLGSEENGRYFSLSLMSGALAVNRKIDRESLCGASTSCLLPVQVVTEHPLELIRVE
VEILDLNDNSPSFATPEREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPNSHFSL
NVKTLKDGKLFPELVLEQQLDHEAKARHQLVLTAVDGGIPARSGTSLISVIVLDINDNAP
TFQSSVLRVGLPENAPTGTLLLRLNATDPDEGTNGQLVYSFGDHTSEAVRNLFGLDPSSG
AIHVLGPVDFEESNFYEIHARARDQGQPAMEGHCVIQVDVEDANDNAPEVLLASLVNPVL
ESTPVGTVVGLFNVRDRDSGRNGDVNLDISPDLPFQIKPSENHYSLLTSQPLDREATSHY
IINLLASDAGLPPLYTHLTIRLNISDVNDNAPHFTQQLYTAYIPENQPPGSLLCTVAASD
PDLGDNARLTYSIVGSQIQEAPASSFVYINPEDGQIFAQRTFDYELLQMLQIVVGVRDSG
SPPLYANTSLHVFVLDQNDNAPAVLHPRPGRELSAPQRLPRSAAPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSAHTGEVRTARALLEDDSDTQQVVVLVKDNGDPSLSSTA
TVLLVLEDEDAEEMPKSSDFLTTPPERSDLTLYLIVALAAISLLSLVTFTFMSAKCLKGH
ADGNRDGGRCCGHRDSPSREFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP
ASDGSDFTFLRPLSVQQPSALAQEPEALRSRSNTLREPSQQAPPNTDWRFSQAQRPGTSG
SQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatggcatccccacagctcgctgggaaatggcaagtgctgtatatgttgtcc
ttgtgctgctgtggctgggtgtctgggcagcttcattattcagtggtggaggagtcagag
ctggggacgctggtggggaatgttgcccaagatctgggcttaaaggtgacagatctgttg
agccgaaggctgcgactgggctctgaggagaatgggcgctatttttccctgagcttgatg
agtggtgctttggcagtgaatcgaaaaattgaccgagagagcttgtgtggagccagcact
agctgcctgctgcctgtgcaggtggtgactgaacaccccttggagctcattcgtgtagag
gtagagatcctggacctcaatgacaactctcctagctttgccactcctgagagagagatg
cgcatctcagagtcagctgcacctggagcccgattcccactggatagtgctcaggatcca
gatgtgggcaccaatactgtgagcttttatactctaagccccaacagccacttctctctg
aatgtgaagaccctaaaggatgggaagctgttccctgagttagtactggagcagcagctg
gatcatgaagccaaggcaagacatcagctggtgctcactgctgtggatggggggatccca
gcccgctcagggaccagcctcatctctgtcatcgtgctggacattaatgataatgctcca
acctttcagtcctcagttctacgagtggggctcccagagaatgcacccacaggtacactg
cttctccgcctcaatgccactgacccagatgagggcaccaatggtcaactagtctactct
tttggagaccacacatctgaagcagtgaggaatctctttggtctggatccaagcagtgga
gcaattcacgtgttgggtccagtagattttgaagagtcaaatttctatgaaattcatgca
agagcccgagaccagggacaacctgccatggagggccactgtgtgattcaagtggatgta
gaggatgccaatgacaatgcccctgaggtgctactggcgtctttggtcaaccctgtccta
gagagcacaccagtggggacagtagtggggttgtttaatgtgcgtgaccgagactctggt
agaaatggtgacgtgaacctggatatatctccagacctgccatttcaaattaagccttct
gagaaccactattcactgctaaccagccagccattggaccgagaggccacatcccattat
attatcaacctcctggccagtgatgctggcttgcctcccctgtacacacatctcactatc
aggctcaatatttcagatgttaatgacaacgcaccccacttcacccagcagctctacact
gcttacatcccagaaaatcagccaccaggctccctcctctgtactgtcgctgcctcagat
ccagaccttggagataatgcccgcctcacctactccattgtagggagtcaaattcaagaa
gctccagcctcttcttttgtgtatatcaaccctgaggatggacagatctttgcccagcgg
acctttgactatgaattgttgcagatgctgcagattgtggtgggggttcgagactctggc
tctcccccactgtatgctaacacatctctccatgtgtttgtccttgaccagaatgataat
gccccagctgtgttgcacccacggcctggcagggaactctcagccccccagcgtctccct
cgatctgcagctcctggttctttggtcaccaaggtgacagctgtggatgctgatgcaggc
cacaatgcctggctctcttattctctgttgccacagtccacagccccaggactgtttctt
gtgtctgcgcacactggtgaggtgcgcacagcccgggccttactggaggatgactctgat
actcaacaggtggtggttctggtgaaggacaatggtgatccttcactgtcctccacagca
acagtacttctagtactggaggatgaggatgcagaggaaatgcccaaatccagtgacttc
ctcacaacgccccctgagcgttcagacctcaccctttacctcattgtggctctagcagcc
atcagtctcttatccttagtcaccttcacttttatgtcagccaagtgcctgaaggggcac
gcagatgggaatagagatgggggccggtgctgcgggcacagggactcaccctctcgagaa
ttttataagcagtccagccccaacctgcaggtgagctcagatggcacactcaagtatatg
gaggtgaccctgcggcccacagactcgcaaagccattgctacaggacgtgcttttcaccg
gcctccgatggcagtgacttcactttccttaggcccctcagcgttcagcagccctcagct
ctggcgcaggagccggaggccttgcgttcccgctctaacacgctgcgggagccaagccag
caagccccgcccaacactgactggcgtttctctcaagcccagagaccaggcaccagcggg
tcccaaaatggtgatgaaactggcacatggcccaacaaccagtttgacacagagatgttg
caagccatgatcttggcctctgccagcgaagctgctgatgggagttccaccctgggaggg
ggcgctggcaccatgggcttgagtgcccgctatggaccccagttcaccctgcagcatgtg
cctgactaccgccagaacgtctacattcccggaagtaatgctacactgaccaacgcagct
ggcaagcgggatggcaaggctccagcaggtggcaatggcaacaagaagaagtcgggcaag
aaagagaagaagtaa
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