Nannospalax galili (Upper Galilee mountains blind mole rat): 103740890
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Entry
103740890 CDS
T03372
Symbol
Trpc5
Name
(RefSeq) transient receptor potential cation channel subfamily C member 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04360
Axon guidance
ngi04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
103740890 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
103740890 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngi01009
]
103740890 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103740890 (Trpc5)
Protein phosphatases and associated proteins [BR:
ngi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103740890 (Trpc5)
Ion channels [BR:
ngi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103740890 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
103740890
NCBI-ProteinID:
XP_008839798
UniProt:
A0A8C6RTH1
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Position
Un
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AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSAELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKTCHGPPLVRTMPRASSAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGQMSEPRSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVRGASQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaagaaggtaaattactcaccgtacagagaccgcatccccctg
caaatcgtgagggctgagacggagctctctgctgaagagaaggctttcctcaatgctgtg
gagaagggagactatgccactgtgaagcaggcactgcaggaggcagagatctactacaat
gtcaacataaactgcatggatcctttgggtaggagtgccctactcattgccattgagaat
gagaacttggaaatcatggagctattgctgaaccacagtgtgtatgtgggcgatgcatta
ctctacgccatccgcaaggaagtagtaggtgctgtggagcttctgctcagctacaggaaa
cccagtggagagaagcaggttcccactctaatgatggacacccagttctctgagttcaca
ccagacatcactcccatcatgttggctgcacacaccaacaactatgaaatcatcaaattg
cttgttcaaaaacgagtcactatcccacggccccaccaaatccgctgcaactgtgtggag
tgtgtgtcaagttcagaagtagatagcctgcgtcactcccgctcccgactgaacatctac
aaggctctagcaagcccctcactcattgccttatcaagtgaggaccctatcctcactgcc
ttccgtctgggctgggagctgaaagagctaagcaaggtggaaaatgagttcaaagctgag
tatgaggagctctcccagcagtgtaagctctttgccaaggacctgctagaccaagctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagaacttgac
ccacagaaataccatgacctggccaagctgaaggtggcaataaaatatcaccagaaagag
tttgttgcccagcccaactgccaacagttgcttgccaccctgtggtacgatggcttccct
ggatggcgacgaaaacactgggtagtcaagcttctaacttgtatgaccatcgggttcctg
tttcctatgttgtcaatagcctatctgatctcacccagaagcaaccttgggttgttcatc
aagaaaccgtttatcaagttcatctgccacacagcatcctacctgaccttcctctttatg
cttctcctggcttctcaacatatcgtcaggacagacctccatgtccagggacctccacca
actgttgtggaatggatgatattaccttgggttctaggtttcatttggggggagattaag
gaaatgtgggatggtggattcactgaatacatccatgattggtggaacttaatggatttt
gcaatgaactccctctacctggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttcccgtccaagggaggaatgggaaatgtggcacccaaccctcatcgcagaggcg
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccttgttcacagccaat
tcccatttagggcctctgcagatctctttgggacgcatgctgcttgatatactcaaattc
ctctttatctactgcctggtactgctagcttttgccaatggactgaaccagctttatttt
tactatgagaccagagctattgatgaacctaacaactgcaaggggatccggtgtgagaaa
cagaacaacgctttctccacgctatttgaaactctccagtcactcttctggtctgtattt
ggccttttaaatctctatgtcaccaatgtgaaggccagacacgagttcaccgagtttgtg
ggagctactatgtttgggacatacaacgtcatctccttggtggtgctgctgaacatgctc
attgccatgatgaacaattcctaccagcttattgccgaccatgctgatattgagtggaag
tttgcaagaacaaagctctggatgagttactttgatgaaggtggaaccttgccacctcct
ttcaacatcatccccagccccaaatcatttctctatcttggcaactggttcaacaacacc
ttctgccccaaaagagaccctgatggaagacgaagaaggcacaacttgagaagcttcaca
gaacgccatgctgatagtctgatacaaaatcaacattatcaggaagttatcaggaattta
gtcaaaagatatgtggctgcaatgataagaaattccaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatacgaagtgcttgacctc
ttaggaaatagaaaacacccaaggagaagcttttccactagcagtgctgaactttctcag
agagatgataccaatgacggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatttaggctgcaagaaaaagacctgccatgggccacctctcgtcagaaccatgccaaga
gccagtagtgcccaagggaagtcaaaagctgagtcatcgagcaaacgctccttcatggga
ccctctctcaagaaactgggtctcctattctccaagtttaacggtcaaatgtctgaaccc
aggtcagagccaatgtacacaatctctgacggaatcgtgcagcagcattatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagtccggggcgcttctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgttcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggcgatggacaggaagaacaagttacaactcggctctaa
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