KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103741079
Entry
103741079         CDS       T03372                                 
Symbol
Smndc1
Name
(RefSeq) survival motor neuron domain containing 1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103741079 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngi03041]
    103741079 (Smndc1)
Spliceosome [BR:ngi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103741079 (Smndc1)
 Complex B
    103741079 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    103741079 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like DUF4349
Other DBs
NCBI-GeneID: 103741079
NCBI-ProteinID: XP_008839987
UniProt: A0A8C6QLF7
LinkDB
Position
Un
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGDNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASPQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagttggcgagctacaaagctcagctacagcaagtggaa
gctgctctgtcaggaaatggagacaatgaagatctgctgaaactgaagaaggatttacaa
gaagttatagaattaaccaaagaccttctgtcaactcaaccttcagaaactcttgcaagt
tcagacagttttgcttctcctcagcctactcactcatggaaagtaggggacaaatgcatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aatggcaccgctgcaatcacctttgctggttatggcaatgcagaagtgactccgttgttg
aatctcaagcctgtagaagaaggaaggaaggccaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagcattgaaaaaa
gcacagagaataaaagaacttgagcaggaaagagaggatcaaaaagtgaaatggcagcaa
ttcaacaacagagcttattctaaaaacaaaaaaggccaggtgaagaggagtatttttgct
tcacctgaaagtgtaactggcaaagttggagtaggaacttgtggaattgcggacaagcct
atgacacagtatcaagatacatctaaatacaatgtcaggcatttgatgcctcagtaa

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