Nannospalax galili (Upper Galilee mountains blind mole rat): 103745457
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Entry
103745457 CDS
T03372
Name
(RefSeq) ATP-dependent RNA helicase A-like
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103745457
03012 Translation factors [BR:
ngi03012
]
103745457
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103745457
5.6.2.6 RNA 3'-5' helicase
103745457
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103745457
Translation factors [BR:
ngi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103745457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Helicase_C
DEAD
AAA_19
nSTAND3
ResIII
AAA_14
Dicer_dimer
AAA_22
PhoH
ATPase
Motif
Other DBs
NCBI-GeneID:
103745457
NCBI-ProteinID:
XP_008845595
LinkDB
All DBs
Position
Un
AA seq
542 aa
AA seq
DB search
TLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYI
KQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLS
QDLELQLQNVVQELDLEIVPPPVDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNW
NPWTSSNIDEGPLAYATTEQISMDLKNELTYQLEQDHNLQGVLQERELLPVKKFEAEILE
AISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAY
ERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDIN
TDFLLVVLRDVVLAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI
QMTQFVPPPKDKKKKDKEDDGGEDDDVTLLKYIETLNVPGAVLVFLPGWNLIYTMQKHLE
NNPHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS
CK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
actctagagtcagaagaagtggatttaaatgctgggctacatggaaactggacactggaa
aatgctaaggctcgtctgaaccagtatttccaaaaagaaaagatccaaggagaatataaa
tacacccaagtgggtcccgatcataacaggagctttattgcagaaatgaccatttatatc
aagcaactgggcagaaggatttttgcacgtgaacatggatcaaataagaaattggcagca
caatcctgtgccctctcacttgtcagacaactctatcaccttggagtgattgaagcttac
tctgggcttacaaagaagaaggaaggagagagagtggagccttacaaagttttcctctcc
caggatttggaacttcagctgcaaaatgtagttcaagagctagatcttgaaattgtgccc
ccacctgttgatccttctatgccagttatactcaacattgggaaattggctcattttgaa
ccatctcaaaggcaaaatgcagtgggggtggttccttggtcaccaccacagtccaactgg
aatccttggactagtagcaacattgatgaggggcccctggcttatgctactacagagcaa
ataagcatggatcttaagaatgaattaacataccagctggaacaagatcataatttacaa
ggcgtcttacaagaaagagagttactgcctgtgaagaagtttgaagccgaaatcttggaa
gcaattagtcagaattcagttgtcattatccgaggtgctactggatgcggtaaaaccaca
caagttccacagtacattttagatgactttatccagaatgacagagcagcagagtgtaat
attgttgtgactcagccaagaaggatcagtgctgttgctgtagcagagcgagttgcgtac
gagagaggtgaagagcctgggaaaagctgtggctacagtgtccgatttgagtctatactt
ccacgccctcatgccagtataatgttttgcaccgtaggtgtgcttctaagaaaactagaa
gcaggcattcgagggatcagtcatgtgattgtggatgaaatccatgaacgagacattaat
actgactttcttttagtggtactgcgagatgtggttttagcctaccctgaagttcgcatt
gttcttatgtctgctactattgataccagcatgttttgtgaatatttcttcaattgcccc
atcattgaagtttatggaagaactttcccagttcaagaatactttctggaagactgcatc
cagatgacccaatttgttcctcctccaaaggacaagaaaaagaaggataaagaagatgat
ggtggtgaagacgatgatgtaactctacttaaatatattgaaactcttaatgttcctgga
gctgtgttggtttttttgcctggctggaatttgatttatactatgcagaagcatttggaa
aataatccacattttggaagtcaccggtatcagattctacctctgcattctcagattcca
cgggaggaacaacgaaaagtgtttgatccagtaccagatggagtaacaaaggttattctg
tccacaaatattgctgaaactagcattaccataaatgatgttgtttatgtcatcgattcc
tgcaagtaa
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