Neisseria gonorrhoeae NCCP11945: NGK_0369
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Entry
NGK_0369 CDS
T00728
Name
(GenBank) putative DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ngk
Neisseria gonorrhoeae NCCP11945
Pathway
ngk03030
DNA replication
ngk03410
Base excision repair
ngk03420
Nucleotide excision repair
ngk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGK_0369
03410 Base excision repair
NGK_0369
03420 Nucleotide excision repair
NGK_0369
03430 Mismatch repair
NGK_0369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngk03032
]
NGK_0369
03400 DNA repair and recombination proteins [BR:
ngk03400
]
NGK_0369
Enzymes [BR:
ngk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NGK_0369
DNA replication proteins [BR:
ngk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NGK_0369
DNA repair and recombination proteins [BR:
ngk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NGK_0369
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGK_0369
MMR (mismatch excision repair)
DNA ligase
NGK_0369
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NGK_0369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH_5
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ACF29062
UniProt:
B4RJQ9
LinkDB
All DBs
Position
complement(305697..308168)
Genome browser
AA seq
823 aa
AA seq
DB search
MNPTAQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQ
RVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVI
EPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTRNVKTVSNIPLRLHGENVPELIEVRG
EVLMLKADFAGLNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQG
GFEAEEHIQELAYFQELGFSLPNGNFGCFKNIGEVLAFYEHMQQKRPELPYEIDGMVVKV
NSLAQQRELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGV
TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHQ
QDDLFAETPSAKQTESVPLHKPYRLPARCPICRSEIEREEGEAVARCSGGMLCQAQRAQG
LIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRIDIPTLQKMKETADKGSSENENG
DAETVSGDLSKYNTQNGKKQPTKWAQNILAGIESGKTPELARFLFALGIRHVGERTAKTL
AQAFGTLERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAV
SLPAAQYAGPQRWITRLPGFKISENKAQALWELAGQSIEGLQNDKALPADWQAWRSKAQN
TALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTFKRDQAQALIEAAGGK
VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLC
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaccgcacaacgcatacacgaactcaccgacctcctcaaccgctacgcctac
gaatactacaccctcgacgcgcccagcatacccgatgccgaatacgaccgcctgttccgc
gaactcgaagcgttggaacgaaaccatcccgagctcaagctgcccgacagcccgacccag
cgcgtcggcggcgagcctttggcaggctttgccgaagtgcgccacgaagtgccgatgctg
tcgctgaccaacgccttttccccgcaagatgaaaacggcgtgttcgaccatgccgaaatg
tacgccttcgaccaacgcgtgcgcgacggcttggacggcggcaatcccgaatacgttatc
gaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattggtgcag
gcggcaacgcgcggcgacggcacgacgggcgaagacgttacccgaaacgtcaaaaccgta
tccaacatccccctgcggctgcacggcgaaaacgtgcccgaactcatcgaggtacgcggc
gaagtgctgatgctcaaagccgactttgccgggctcaataaacgccaagccgaaaacggg
caaaaaccctttgccaatccgcgcaacgccgccgccggcagcctgcgccaactcgattcg
cgcatcaccgcgcaacgcaaactgcactttttcccctattcgattgcccgtcagcaaggc
ggtttcgaagctgaagaacacatccaagaactcgcctatttccaagaactcggcttcagt
ctgcccaatggcaatttcggctgtttcaaaaatatcggcgaagtattggcgttttacgaa
cacatgcagcaaaaacgccccgaactgccctacgaaatcgacggcatggtggtcaaagtc
aacagcttggcgcaacagcgcgaactcggcttcatctcccgcgcgccgcgttgggcggtt
gcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtgcaaatc
ggcaggacgggcgcggtaacgccggttgcccgcctgcaacccgtattcgtcggcggcgta
accgttaccaacgccaccctgcacaatcaggacgaagtatcgcgcaaagacgtgcgcgtc
ggcgataccgtcgtcgtgcgccgcgccggagacgtgattcccgaagtcgtgcgcgtgatt
ttcgaacgccgcccgatgcaggaaaccgccgttgccgtttcagacggcatcgggcatcag
caggacgacctgtttgccgaaacaccgtccgccaagcaaaccgaatccgttccgctccat
aagccctaccgcctgccggcccgctgccccatctgccgcagcgaaatcgaacgcgaagaa
ggcgaagccgtcgcccgatgcagcggcggtatgctttgtcaggcacaacgcgcgcaaggc
ttaatccacttcgcctcgcgcaaagcgatggacatcgacggcttgggtgaaaaacaaatc
gaacagctggtcgcccaagacctcgtccgccatttcgccgacctctaccgcatcgatatt
ccgaccctgcaaaaaatgaaggaaacggcggataaagggtcatctgaaaacgaaaacggc
gacgcagaaacggtttcaggcgacctgtctaaatacaatacccaaaacggcaaaaaacaa
ccgaccaagtgggcgcaaaacatcctcgcaggcatagaatccggcaaaacgcccgaactt
gcccgcttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctg
gcgcaggcattcggcacattggaacgcgtccgccgcgcccccgaacccgtcctcgcctgc
ctgcccgacatcggcacggtagtggcgcgttccattgcccacttcttcgcccaagccgaa
cagcaggcgatgatagacgagctgctcgccgcaggcgttgccccgcaagcccaagccgtc
agcctgcctgccgcacaatatgccgggccgcaacgctggattacccgcctgcccggtttc
aaaatcagcgaaaacaaagcccaagccttatgggaactcgccggacaaagtatagaagga
ctgcaaaacgacaaagccctccctgccgactggcaggcgtggcgcagcaaagcgcaaaac
accgccctgctcgaaaacctaaaaaccttcttcgcgcaaatgccgtctgaagacgaggcg
gcgcaaggttcagacggcatcaataaagccgtggcaggcaaaacctttgtgttaaccggc
accctgcccaccttcaaacgcgaccaagcccaagccctaatcgaagccgcaggcggcaaa
gtgtccggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaagccgcgggcagc
aagctggaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttacc
ctgctctgctga
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