KEGG   Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_PA08620
Entry
RG1141_PA08620    CDS       T03208                                 
Name
(GenBank) VirD4 type IV secretion protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
ngl  Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ngl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RG1141_PA08620
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ngl02044]
    RG1141_PA08620
Enzymes [BR:ngl01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RG1141_PA08620
Secretion system [BR:ngl02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RG1141_PA08620
SSDB
Motif
Pfam: T4SS-DNA_transf TrwB_AAD_bind TraG-D_C
Other DBs
NCBI-ProteinID: CDN57694
UniProt: A0A068THV5
LinkDB
Position
pHAMBI1141a:902407..904428
AA seq 673 aa
MSRAYLAAYLFFCCLIALAVWMIGYALILQFVFKDSRILKLTVSENPFAPIQQLMLYSDS
RPLQIAAFGALLSAVAISVAAGVFGLRRPSNPLGDAAFQDVAMIRRGKWFRKDGHIFGRI
GGKILRRLDDRHHLIIGPTRSGKGVGYVIPNALMFPGSMIVTDLKGEIYQHTAGYRKSTG
NQVFLFSPGAQKTHRWNPLDFVRQDRGSRTIDIQNMASTLIPETIGSENAVWQGTAQQVI
AGVISYVLESQHYKNRRNLGEVNAIFNAGVDLQVLMKLIKENEPDLSRFTTDSFNAYISL
NERAARSALLDIQKAMQPFRNERVIAATTVTDIDLASMRRRPVTIYLAPNISDVTILRPL
LTLFVQQTMDLLTRDFDPSALPAYFLLDEFRQLKRMDEIMNKLPYVAGYNIKMAFIVQDL
KNLDEIYGETARHSLLGNCGVQLILGANDQATAEYVSRALGKKTIRYKSESRTIELMGLP
RRTKVEQIRERDLMMPQEVRQLPSERMILLIEGQPSIYAGKLRFHEIAAFKNAAEFSLRH
PPPVPEVDFVAPRPVPALATKDPALLELGTNPPDRNPLPASDIPLSIARSLSQSIEDGRL
DEPKRPPGPRQDAHDSRIAEMESAVKASAERLTFTVAAKIAGAGGSVRSRASVDEILRQT
VPDPADLGIASVT
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagtcgcgcttaccttgcagcctatcttttcttctgctgcctgatcgcgctggccgtc
tggatgatcggctacgcgctgatcctgcagttcgtgttcaaggacagccgcatcctcaag
ctgacggtcagcgaaaatcccttcgcgccgatccaacagctgatgctctattccgacagt
cggcctttgcagatcgcggcatttggcgcgctgctttccgccgtcgccatatcggtggca
gccggagtgttcggcctgcgacgaccatcgaacccactcggcgatgccgccttccaggat
gttgctatgatccggcgtggaaagtggtttcgcaaagacgggcacatcttcggacggatc
ggcggcaagatcctgcgccgcctggacgaccggcatcatctgatcattggcccgacccga
tccggcaagggcgtcggttacgtcattccaaacgcgttgatgtttcccggttcgatgatc
gtcacggatctcaaaggtgagatctaccaacatacggcgggctaccgcaaatcgaccgga
aaccaggtttttctgttctcgcccggggcgcagaagacccaccgctggaacccgctggac
ttcgtccggcaggaccgcggcagtcgcacgatcgacatccagaacatggcaagcaccctc
atccccgagaccatcggctcggaaaatgcggtctggcagggaacggcgcagcaggtgatt
gccggcgtcatcagctatgtgctcgaaagccagcactacaagaaccgccggaacctcggc
gaggtcaacgcgatcttcaatgccggcgtcgatcttcaggtgctgatgaagctgatcaag
gaaaacgaaccggacctgtcgcgcttcacgaccgatagcttcaatgcctatatttcgttg
aacgagcgggcggcgcgatcggcactgctcgacatccagaaggcgatgcagccatttcga
aacgagcgcgtcatcgctgcgaccaccgtcacagatatcgatctggcgtcgatgcgccgg
cgcccggtgacgatttaccttgcgccgaacatcagcgacgtcaccattctgcgccctctc
ctgacgctgttcgtccaacagacgatggacctcctcacccgtgacttcgatccgagcgcc
ctgcccgcctatttcctgcttgacgagttccgccaattgaagcggatggacgagatcatg
aacaagctgccttacgtggcgggctacaacatcaagatggccttcatcgttcaagatctg
aaaaatctcgacgaaatatacggcgagaccgcacggcactccctgcttggcaattgcggc
gtccaacttatccttggtgccaacgaccaggcgacggccgaatatgtgtcgcgtgcactg
ggaaagaaaacgatccgctacaagtcggaatcgcggacaatcgaactgatgggcctaccg
cgtcgaacgaaagtcgagcagatccgcgaacgcgatctgatgatgccgcaggaagttcgg
caattgccttcagaacgaatgatcctgttgatcgagggacagccgtcgatatacgcagga
aagctacgttttcacgaaattgcagcgttcaaaaacgcggcggaattttctctgaggcac
ccgcccccagtgcctgaagtcgatttcgttgcgccacggccggtgcccgccctggccacg
aaagatccggcattgcttgagcttggaaccaatccgccagatagaaacccgctgcccgcg
tctgatatcccgctctcgattgccaggtcattatcgcagtcgatcgaggatggcaggctg
gacgaaccgaaacggccaccgggtccgcgtcaggatgcacacgacagccgtatcgccgaa
atggaatccgcggtcaaagcctcggcagaacgcttgacgttcactgtggcagccaagatt
gcaggagccggcggatcggtgcgcagtcgcgccagcgtcgacgaaatactgcgacagacc
gttcctgatcctgccgatctcggcatcgcctctgtcacctga

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