Neisseria gonorrhoeae FA 1090: NGO_0235
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Entry
NGO_0235 CDS
T00237
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ngo
Neisseria gonorrhoeae FA 1090
Pathway
ngo03030
DNA replication
ngo03410
Base excision repair
ngo03420
Nucleotide excision repair
ngo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGO_0235
03410 Base excision repair
NGO_0235
03420 Nucleotide excision repair
NGO_0235
03430 Mismatch repair
NGO_0235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngo03032
]
NGO_0235
03400 DNA repair and recombination proteins [BR:
ngo03400
]
NGO_0235
Enzymes [BR:
ngo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NGO_0235
DNA replication proteins [BR:
ngo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NGO_0235
DNA repair and recombination proteins [BR:
ngo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NGO_0235
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGO_0235
MMR (mismatch excision repair)
DNA ligase
NGO_0235
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NGO_0235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
Nlig-Ia
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AAW88988
UniProt:
Q5F9Z9
LinkDB
All DBs
Position
complement(236601..239090)
Genome browser
AA seq
829 aa
AA seq
DB search
MNLYESMNPTAQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKL
PDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGG
NPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTRNVKTVSNIPLRLHGENVPE
LIEVRGEVLMLKADFAALNQRQTENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYS
VARQQGGLIAEEHIQELAYFQALGFSLPNGNFGCFKNIGEVLAFYEHMQQKRPELPYEID
GTVVKVNSLAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQP
VFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVS
DGIGHQQDDLFAETPSAKQTESVPLHKPYRLPARCPICRSEIEREEGEAVARCSGGMLCQ
AQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRIDIPTLQKMKETADKGS
SENENGDAETVSGDLSKYNTQNGKKQPTKWAQNILAGIESGKTPELARFLFALGIRHVGE
RTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVA
PQAQAVSLPAAQYAGPQRWITRLPGFKISENKAQALWELAGQSIEGLQNDKALPADWQAW
RSKAQNTALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTFKRDQAQALI
EAAGGKVSGSVSKKTDYVVAGETAGSKLEKANALGVSVLSEAELLTLLC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
ctgaacctgtacgaatccatgaacccgaccgcacaacgcatacacgaactcaccgacctc
ctcaaccgctacgcctacgaatactacaccctcgacgcgcccagcatacccgatgccgaa
tacgaccgcctgttccgcgaactcgaagcgttggaacgaaaccatcccgagctcaagctg
cccgacagcccgacccagcgcgtcggcggcgagcctttggcaggctttgccgaagtgcgc
cacgaagtgccgatgctgtcgctgaccaacgccttttccccgcaagatgaaaacggcgtg
ttcgaccatgccgaaatgtacgccttcgaccaacgcgtgcgcgacggcttggacggcggc
aatcccgaatacgttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgc
gacggcgtattggtgcaggcggcaacgcgcggcgacggcacgacgggcgaagacgttacc
cgaaacgtcaaaaccgtatccaacatccccctgcggctgcacggcgaaaacgtgcccgaa
ctcatcgaagtacgcggcgaagtgctgatgctcaaagccgattttgccgctttaaaccaa
cgtcagaccgaaaacgggcaaaaacctttcgccaatccgcgcaatgccgccgccggcagc
ctgcgccaactcgattcgcgcatcaccgcgcaacgcaaactgcactttttcccctactcc
gtcgcccgccagcaaggcggtttgattgcggaagaacacatccaagaactcgcctatttc
caagcactcggcttcagtctgcccaatggcaatttcggctgtttcaaaaatatcggcgaa
gtattggcgttttacgaacacatgcagcaaaaacgccccgaactgccctacgaaatcgac
ggcacggtcgtcaaagtcaacagcttggcgcaacagcacgaactcggcttcatctcccgc
gcgccgcgctgggcggttgcccacaaattccctgccgaagaagccctgaccattgtcgaa
gcgattgacgtgcaaatcggcaggacgggcgcggtaacgccggttgcccgcctgcaaccc
gtattcgtcggcggcgtaaccgttaccaacgccaccctgcacaatcaggacgaagtatcg
cgcaaagacgtgcgcgtcggcgataccgtcgtcgtgcgccgcgccggagacgtgattccc
gaagtcgtgcgcgtgattttcgaacgccgcccgatgcaggaaaccgccgttgccgtttca
gacggcatcgggcatcagcaggacgacctgtttgccgaaacaccgtccgccaagcaaacc
gaatccgttccgctccataagccctaccgcctgccggcccgctgccccatctgccgcagc
gaaatcgaacgcgaagaaggcgaagccgtcgcccgatgcagcggcggtatgctttgtcag
gcacaacgcgcgcaaggcttaatccacttcgcctcgcgcaaagcgatggacatcgacggc
ttgggtgaaaaacaaatcgaacagctggtcgcccaagacctcgtccgccatttcgccgac
ctctaccgcatcgatattccgaccctgcaaaaaatgaaggaaacggcggataaagggtca
tctgaaaacgaaaacggcgacgcagaaacggtttcaggcgacctgtctaaatacaatacc
caaaacggcaaaaaacaaccgaccaagtgggcgcaaaacatcctcgcaggcatagaatcc
ggcaaaacgcccgaacttgcccgcttcctgttcgcgctcggcatccgccacgtcggcgaa
cgcaccgccaaaacgctggcgcaggcattcggcacattggaacgcgtccgccgcgccccc
gaacccgtcctcgcctgcctgcccgacatcggcacggtagtggcgcgttccattgcccac
ttcttcgcccaagccgaacagcaggcgatgatagacgagctgctcgccgcaggcgttgcc
ccgcaagcccaagccgtcagcctgcctgccgcacaatatgccgggccgcaacgctggatt
acccgcctgcccggtttcaaaatcagcgaaaacaaagcccaagccttatgggaactcgcc
ggacaaagtatagaaggactgcaaaacgacaaagccctccctgccgactggcaggcgtgg
cgcagcaaagcgcaaaacaccgccctgctcgaaaacctaaaaaccttcttcgcgcaaatg
ccgtctgaagacgaggcggcgcaaggttcagacggcatcaataaagccgtggcaggcaaa
acctttgtgttaaccggcaccctgcccaccttcaaacgcgaccaagcccaagccctaatc
gaagccgcaggcggcaaagtgtccggcagcgtgtccaaaaaaaccgactacgtcgtcgcc
ggagaaaccgcgggcagcaagctggaaaaagccaatgccttgggcgtttccgtcctcagc
gaagccgaactgcttaccctgctctgctga
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