Neoarius graeffei (lesser salmon catfish): 132869815
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Entry
132869815 CDS
T10798
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132869815 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132869815 (lemd3)
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
132869815 (lemd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
132869815
NCBI-ProteinID:
XP_060759248
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Position
21:47510237..47531067
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AA seq
853 aa
AA seq
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MASVQLTDEELFSELKRFGFSPGPVTENTRPVYLKKLKKLREEQQQRSRGVKGRNGSSVN
NNSSSSSASSSGGGGHNTAAGTSAFRARPTASDVTYVNSTRSPGTRPLLNEKRADRSGKF
VLGFSSDESDVEAPQKKGGLNHSGGSRRDRGSALHSVRPTTPETPAAGARRSTGLGLNNS
SSSSKFHLGLSESRRSGLGSPWWTERGKSSFGDLDKDDGEPEDGLEEEPQRTGRTLNGSK
GSYSNKLCGDYSDSDEEDEEEEEREYRRDRRLLSRRSATKFTSTPYKSVWESERVREKVA
DTRPGAAGQDMASEDDRETSEFTGSYLKSSRFTSVNGEEAAATTESFSSGLRPRFSTYNS
LASNYAFNHSNHTGSNHNYSPKRKATGPEDELLEQFKRDEVSVTGGFSAHYLSMFLLTAA
CLFFVLLGLMYLRMRGSGAPDGVNGRSHPFGAEFDKTYSHTERDTILSLLLHLHDHLANT
AGEHDCKDLNEPLNRSVSFSEATKYLKLQNKSYECWIETAMEWIIRTGDISGIRLITDDP
MQLVEDVSDITRLESTHPRMSFICRLRRAFFTVIYRVLLILAGIAIVYGVLRYMKYRWRR
EEEETRQMYDMVERIIDVLRSHNEACQENKDLQPFLPILHVRDSLIQPQERKKMKKVWDR
AEKFVSANDSRIRTEEQRIGGADFLVWRWLQPPLSCDKMCNMPSKVWQGKAFPLDRRNSP
PNSLTPCLKIRNMFDPVMEVGENWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKC
LSAEHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQALGCNTPLKPSSSSMNTMARL
HQRSSPSSFLSFS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtgcagctaacggacgaggagcttttctcggagttaaaacgcttcggtttc
tctccgggcccggttacggagaacacgcggcctgtatacttaaaaaaactcaaaaaacta
cgcgaggagcaacaacagcgttccagaggcgtgaaagggcgaaacggcagcagcgtcaac
aataacagtagtagcagcagtgctagcagcagcggcggcggtggtcataacacagcggcg
ggaacctcagcgttccgggctcggccgacggccagtgacgtcacgtacgtgaactcgacg
cgaagcccaggcactcgaccacttttgaacgaaaagcgagcagacaggagcggaaagttc
gtcttgggctttagctcggacgagtcagacgtggaggcgccgcagaaaaagggaggcctg
aaccacagcggcggcagcaggagagaccgaggctcggcgcttcactccgtaaggcctact
acaccagagacacccgccgccggcgcacgcagaagtaccggtctcggtttaaacaacagc
agcagcagtagtaaattccatctcgggctttcagagagcagaagaagcggcctcggttct
ccgtggtggacagaacgggggaaatccagcttcggagacttggataaggatgacggcgaa
ccggaggacggtctcgaagaggagcctcaaaggaccgggagaactctgaacggtagtaaa
gggtcttacagtaacaagctctgtggggattattctgattcggacgaagaagacgaggag
gaggaggaacgggaataccgacgcgaccgccgtctgctctccagacggagtgcgacgaag
ttcacgtccactccgtacaaaagcgtctgggagtcggagcgcgtccgggaaaaggttgca
gacaccaggcccggtgctgccggtcaagacatggcgagtgaggacgacagagagaccagc
gagtttacagggagctatctgaaaagttcccgcttcacgagtgtaaacggcgaggaggcc
gcggcgaccaccgagagcttcagctccggactcagacctcggttttccacgtacaacagc
ctggcctccaattacgccttcaaccactcgaaccacaccggctccaaccataactacagc
cccaaacggaaggccacgggaccggaggatgagctgctggagcagtttaaacgggacgag
gtgtcagtcaccggcggcttcagcgcacactacctgtccatgttcctcctgaccgccgcc
tgcctcttcttcgtgctgctcggcctcatgtacctgcgcatgcggggctctggagcccca
gacggagtgaatggcagaagccacccatttggtgcagaatttgataaaacatatagccac
acagagagagacaccatcctcagtcttctcctccatctgcatgaccatctggccaatact
gcaggtgaacatgactgcaaagatctcaacgaaccattaaacagaagtgtctccttctcg
gaggccaccaagtatttgaagctgcaaaataaaagctatgaatgttggatagaaacagcc
atggagtggatcattagaactggagatatttctggaataaggttgattacagatgaccct
atgcaactagtggaggatgtgtctgacattactcgtctggagtccacacaccctcgcatg
tccttcatttgccgccttcgacgagccttcttcactgtgatctacagagtgctcctcatc
cttgctggaattgccattgtttatggcgtactgcgttacatgaagtaccgatggaggagg
gaggaggaggagaccaggcagatgtatgacatggtggagagaatcatagatgtcctgagg
agtcataatgaagcatgccaggaaaacaaggacctgcagccttttctgcccattcttcat
gtgcgggattctctcattcagcctcaggagaggaagaagatgaagaaagtatgggataga
gctgaaaaatttgtctctgcaaacgactcccgcatccggacagaagaacagaggattgga
ggagcagatttcctggtgtggcggtggcttcagcctcccctgtcttgtgacaagatgtgc
aatatgccttccaaagtatggcagggaaaagcatttccactggatcgaaggaattcacca
ccaaacagtttaacgccgtgtctgaaaattcgcaacatgtttgaccctgtaatggaggtg
ggggaaaactggcatcttgccattcaagaagccattttggaaaaatgcagcgataatgat
gggattgtccacattgccgttgataagaattcacgagagggctgtgtttatgtgaagtgc
ctttcagccgagcactctgggaaagctttcaaggcactgcatggctcttggtttgatgga
aagctggtgactgttaagtacctacgtcttgaccgctaccaccagcgtttcccgcaggcc
ttgggctgtaacacaccactgaaaccatccagttccagcatgaacaccatggcccggtta
caccagcgctccagcccatccagcttcctaagcttctcctga
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