KEGG   Neoarius graeffei (lesser salmon catfish): 132870575
Entry
132870575         CDS       T10798                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03420  Nucleotide excision repair
ngra04110  Cell cycle
ngra04114  Oocyte meiosis
ngra04120  Ubiquitin mediated proteolysis
ngra04141  Protein processing in endoplasmic reticulum
ngra04310  Wnt signaling pathway
ngra04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132870575 (rbx1)
   04120 Ubiquitin mediated proteolysis
    132870575 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132870575 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    132870575 (rbx1)
   04350 TGF-beta signaling pathway
    132870575 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    132870575 (rbx1)
   04114 Oocyte meiosis
    132870575 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ngra04121]
    132870575 (rbx1)
   03400 DNA repair and recombination proteins [BR:ngra03400]
    132870575 (rbx1)
Enzymes [BR:ngra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     132870575 (rbx1)
Ubiquitin system [BR:ngra04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   132870575 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     132870575 (rbx1)
   Cul2 complex
     132870575 (rbx1)
   Cul3 complex
     132870575 (rbx1)
   Cul4 complex
     132870575 (rbx1)
   Cul7 complex
     132870575 (rbx1)
   Cul8 complex
     132870575 (rbx1)
   Cul9 complex
     132870575 (rbx1)
DNA repair and recombination proteins [BR:ngra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132870575 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132870575 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 132870575
NCBI-ProteinID: XP_060760247
LinkDB
Position
22:6558260..6563762
AA seq 108 aa
MAAAMDVDTPSGANSGSSKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtggataccccgagcggagcaaacagcggttccagtaaaaag
cgttttgaagtgaagaagtggaatgcggtggctctgtgggcatgggacatcgtggtggat
aactgtgccatctgcagaaaccacatcatggacctgtgtatagagtgtcaggccaaccag
gcttctgccacatcagaggagtgcacagtggcctggggagtgtgtaaccatgcgttccat
ttccactgcatctcccgctggctgaagacgaggcaggtgtgtcctctggacaacagggag
tgggagttccagaagtacggacactga

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