Neoarius graeffei (lesser salmon catfish): 132870755
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Entry
132870755 CDS
T10798
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04218
Cellular senescence
ngra04514
Cell adhesion molecules
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132870755
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132870755
04145 Phagosome
132870755
09143 Cell growth and death
04218 Cellular senescence
132870755
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132870755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132870755
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132870755
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132870755
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Antigens
132870755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
132870755
NCBI-ProteinID:
XP_060760568
LinkDB
All DBs
Position
22:complement(20252550..20265242)
Genome browser
AA seq
338 aa
AA seq
DB search
MWKVKIIYIIVVVSRFFLLPQQSCCEVNSLTGYFLGSEGLGLPSYIERLDVNDATVFYYD
SSMHATAPRPDWLNTIAGQQLWKERRFTSLDNRELMAVAFQTAIKQFDLTGTRSDINIYQ
GYGRCDLYPDGTVRGVLTHGFNGMDFVSLDIDSKAFIASVPQAVKYKRIREKNIGRLEYL
VSYYKKTCSDELKIYLEHSPAVIVKKAPEVRIFEKQRAGSTLLTCHVTGFYPKAVQVKWI
GVDLQQEDLETNNVLPNGDGTYQTRRSVIRPEENTGDQHYSCIVYHSSVEGNITVTWGKE
EKPFRLPVWMTLGFIFMVAVVGLVIRCFIKSKDAVTRK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagtaaagattatttatattatagtcgtcgtttcccgcttcttcctccttccc
cagcagtcttgttgtgaggttaattccctcactggctatttcctcggctctgaaggcctc
ggccttcccagttacatagagagactcgatgtgaatgatgccactgtcttttactatgac
agcagcatgcatgcaacagcaccacgtcccgattggctcaacaccatagctggtcaacag
ctctggaaagagaggagatttacatcactggacaacagggaacttatggctgtggcattc
caaacagccatcaagcagttcgacctcacaggcaccagatcagatattaatatatatcaa
ggctacggtcggtgtgacctctatccagatggcacagtcaggggagtgttaactcacggg
ttcaatgggatggacttcgtaagtttagatattgacagcaaggcattcatcgcatctgtt
cctcaagccgtcaaatataaaaggattcgggagaagaatataggcaggcttgaatatctc
gtgtcttactacaaaaagacctgttctgacgaacttaagatttacttagagcattctcct
gcagtcatcgtgaagaaagctccagaggtcaggatttttgagaagcagagagctggttcc
actctcctcacgtgtcatgtgactgggttttaccccaaagccgtgcaggtgaagtggatt
ggggtagatttacagcaggaggatctcgagacgaacaatgttctgcctaatggtgatggt
acatatcagaccagaaggagtgtgatcagacctgaggagaacacaggagatcagcactat
agctgtatagtgtatcacagcagcgtcgagggaaatattacagtcacctggggtaaagaa
gagaaacccttccggcttcctgtttggatgacgctaggcttcattttcatggttgctgta
gttgggcttgtaatacgatgcttcattaaaagtaaagacgctgtgacccgcaagtga
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