Neoarius graeffei (lesser salmon catfish): 132870756
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Entry
132870756 CDS
T10798
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04218
Cellular senescence
ngra04514
Cell adhesion molecules
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132870756
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132870756
04145 Phagosome
132870756
09143 Cell growth and death
04218 Cellular senescence
132870756
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132870756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132870756
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132870756
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132870756
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Antigens
132870756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
132870756
NCBI-ProteinID:
XP_060760569
LinkDB
All DBs
Position
22:complement(20266405..20274018)
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AA seq
333 aa
AA seq
DB search
MRKAKIIYTLVFFFSLLQQSCCEVNSLTGYFLGSEGLGLPSYIERIAVNDATVFYYDSSM
HSRTPCPDWLNTIAGQELWKERRLSTEDNRVAMAVALQTAIKQFNLTGTLSDINVYQAYG
RCDLYPDGTVKAVLTHGFNGMDFLTVDIDSKAFIASVPQAVKYKRIREKDVVRLEHLMSY
YKKTCFDYLNVSLKNSPAVNMKKAPEVRIFEEQRAGSTLFTCHVTGFYPKAVQVKWIGAD
LQQEDLEMNDVLPNGDGTYQTRRSVIRPEENTGDQHYSCVVYHSSVEGNITVTWGKEEKL
FRLPVWMTLVCIFMVAVVGLVIRCFIKSKDAVT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagcaaagattatttatactttagtcttcttcttctcccttctccagcagtcg
tgttgtgaggttaattccctcactggctatttcctcggctctgaaggcctcggccttccc
agttacatagagagaatcgctgtgaatgatgccactgtcttttactatgacagcagcatg
cattcaagaacaccatgtcccgattggctcaacactatagctggtcaagaactctggaaa
gagaggagactttcaacagaggacaacagggtagctatggctgtagcactccaaacagcc
atcaagcagttcaatctcacaggcaccttatcagatattaatgtatatcaagcctacggt
cggtgtgacctctatccagatgggacagtcaaggcagtgttaacccacgggttcaatggg
atggacttcttaactgtagatattgacagtaaggcattcatcgcatctgttcctcaagct
gtcaaatataaaaggattcgggagaaggatgtagtcaggcttgagcacctgatgtcttac
tataaaaagacctgttttgactaccttaacgtgtccttaaagaattctccagcagtcaac
atgaagaaagctccagaggtcaggatttttgaggagcagagagctggttccactctcttc
acgtgtcatgtgactgggttttaccccaaagccgtgcaggtgaagtggattggggcagat
ttacagcaggaggatctcgagatgaatgatgttctgcctaatggtgatggtacatatcag
accagaaggagtgtgatcagacctgaggagaacacaggagatcagcactacagctgtgta
gtgtatcacagcagcgtcgagggaaatattacagtcacctggggtaaagaagagaaactc
ttccggcttcctgtttggatgacgttagtctgcattttcatggttgctgtagttgggctt
gtaatacgatgcttcattaaaagtaaagatgctgtgacctga
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