Neoarius graeffei (lesser salmon catfish): 132871464
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Entry
132871464 CDS
T10798
Symbol
dsela
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ngra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132871464 (dsela)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
132871464 (dsela)
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_3
DUF4962
Sulfotransfer_1
Motif
Other DBs
NCBI-GeneID:
132871464
NCBI-ProteinID:
XP_060761620
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Position
23:4467362..4472559
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AA seq
1207 aa
AA seq
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MAVCIVKSALLLCLVNLGFSFSGIFDPSGKYGTVSDRDERADFHTDTNATTERGFHMPSN
VHPNLYFDLAEVRRLKKKASGTHGHVFKVIRNAVTTMLESPTLYLPPMNHEEFAKKWNEI
YGNNLPPLALYCLLQPEDSTAFQFLIKYMDRMAEYPDWMVTSAPNDEVPISHSLTGFATA
YDFIYTYLDTQRKIRYLKKIRSVTAELYELSKHRGWGRQFLQNHQTTNILAILTGAIVTG
VHKDRETMMWKQVAVNYMEKTMFLLNHIIDGSLDEGVAYGSYTAKSITQYVFLASRHFEI
DNKNNNWLRAHFMFYYATVLPGFQRTVGIADSNYNWFYGPESQLVFLDAFVLRNGSGNWL
AQQIRKSRPKDGPMTPSVAQRWATLHTEFIWYDAELTPEPPPDFGKADMHVFSNWGVVTY
GAGLPSGQDNTFVSFKSGKLGGRAVYDIVHAKPYTWLDGWTNFNPGHEHPDQNSFTFAPN
GQVFVSEALYGPKYSYLNNVLVFAPSPTSQCNAPWEGQLGECSKWLKWGEKEVGDSAGEV
IAASSHQDTMFVSGEAVSAYSSAMKLVSVYRALVLLNSQTLLVFDHVEKHEKSPLTSFSA
FFHNLDIDLRYVPHRSLNRYSGALMDVWDAHYEMFWFDNQGVSPVGRIQEVEQVAEFKKR
WTQFINVTFSMDGVVSRVAYLMHGPFVRVSDCRFVDNSKNGVKILVTLNDTETTVSIATN
YKDIGARHSYLGFAGFAKAENKHKIIHFGQGVQVLPRQVKKDSTFNFGFMINVIAVWILC
FAIAVLTIKRKFNVSSRKLIRCTVISVLLFWVLELLVTSHRCQEVLCGIMWRDLRVSEEA
VTRSTFPFDRTPDTLPFIIVTSLPGSGAEILQPLFDNSSDFVYLSIPSTYLRIPETSFAP
DSFTDACKWSRADAQNGKFRAIQGWFHSMMHSIRLHLQNIQLYKSSIEAGNKGSAQETRK
RRKLLTDTSEIGDRRSTAREVEYIKELRQHLSNFPNACPVLNLRSGSWSLKLPFVQEVIG
RSLRSVQVVRDPRAWIYLMLYNSKPSLYASKNIRKHLLNILNQPRDRAGQTCTRFDAAFQ
PLRKILAQPDANPVLLLAHLWLAHTSASLRASADLPSHTYLQVKFEDIVNFPEDTAEKIH
RFIGVPVSPAAINQLAFATSTNLYHLIYEGDISPAKINMWRENMAPDQIRLIEHVCGTVM
DILEYKR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatgcatagtgaaatctgcgcttctgctgtgtcttgtgaatcttggattttcc
ttttctgggatatttgacccttcaggcaaatatggcacagtcagcgatcgtgacgagcga
gctgatttccatacagacaccaacgcgactacggagcgaggatttcacatgccatcgaac
gtccaccccaacctttatttcgacctcgcagaggtgcgccggctgaaaaagaaagctagc
ggtacacacggacacgtgtttaaagttatacgaaatgctgtgacgactatgctcgagagc
ccgacgctttacctgccgcccatgaaccatgaggaatttgcaaagaaatggaacgagatt
tacggcaacaaccttccaccgcttgcgctgtactgtctactccagcctgaagatagcacc
gcgttccagtttttaattaaatacatggatcgtatggctgaatatccggactggatggtg
actagcgcgccaaatgatgaggttccgatatcccattctctcactggcttcgctacagct
tatgacttcatatatacctatctggacacccagcgaaagattcggtaccttaagaagatc
cgttccgtcacagcggaactttacgaactgtccaagcatagaggttggggccggcagttt
ctacaaaaccaccagactacaaacatactagccatccttacaggagccatcgtaactggt
gtacacaaagaccgtgagaccatgatgtggaaacaggtcgccgtgaactacatggaaaag
accatgttcctgctgaaccatatcatagacggttccctggatgaaggcgtagcgtatggc
agctacacagccaaatccatcactcagtacgtgttcttagcatcacgtcattttgaaata
gacaacaagaataacaactggctgagagcccacttcatgttctactacgccaccgtgctc
cctggttttcaaagaaccgtgggcattgctgattcaaactacaactggttctatggaccg
gagagtcagttggtgttcctggacgcgtttgtgctcaggaacggctcaggaaactggctg
gcacagcagatcagaaagtcgcggcccaaggatggacccatgacgccgtccgtagcgcag
cgctgggctacattacacaccgagtttatctggtacgacgcggagctcactcctgagcca
ccgcctgattttgggaaagcagacatgcatgttttttcaaactggggggtggtgacgtac
ggcgcaggactaccttcagggcaggacaacacttttgtgtcttttaaatctgggaagtta
ggcggacgagccgtgtatgacattgttcacgctaagccttatacctggctcgatggctgg
acgaacttcaaccctggtcatgaacacccagatcagaactcgtttacttttgcaccaaac
ggacaagtgttcgtctcggaagctttgtacggaccaaaatacagttatcttaacaacgtc
ttggtatttgcaccttctccaacgagccagtgcaacgcaccatgggaggggcagctcggg
gaatgttccaaatggttaaaatggggagaaaaggaagtcggagacagcgctggcgaggtc
attgcggcgtcttcgcaccaggacacgatgtttgttagcggtgaagccgtgtctgcttat
tcgtccgctatgaagctcgttagtgtttatcgagccctggttctgctcaactcccaaacc
ttattagtgttcgatcacgttgaaaagcatgaaaagtctcccctgacgtcgtttagtgcc
tttttccacaatcttgacatcgacctgaggtatgttccccacaggtctttgaataggtac
agtggagctctgatggatgtatgggacgcccattacgagatgttttggttcgataatcag
ggagtcagtcctgttggcaggatacaggaagtagaacaggtcgcagagttcaaaaagaga
tggacacagttcataaacgttactttttccatggacggcgtagtcagcagggtggcttac
ttaatgcacggcccttttgtcagagtatcggactgcaggttcgttgacaacagcaaaaac
ggagttaaaatcttggttacgttgaatgacaccgagactaccgtgtccatagcaacaaac
tacaaagatattggtgccagacacagttacttaggctttgcagggtttgcaaaagcagag
aataaacacaagatcattcattttggtcagggagttcaggttttacccagacaagtgaaa
aaagactccacgtttaacttcggtttcatgatcaacgtcatcgcagtgtggattctgtgt
tttgccattgcggttttgaccatcaagagaaagtttaacgtgtcgtcccgtaagcttatc
cgctgcacggttatttcagtgctgcttttctgggtgttggaactcttagtgacgtctcat
cgttgtcaggaggtgctgtgcggcatcatgtggagggatctccgtgtctccgaggaagcc
gtcactcgatccaccttccctttcgatcgcactccagacacccttccgttcataatcgtc
acctctcttcctggctccggagccgagatccttcaaccccttttcgacaacagttcggac
tttgtgtatctcagcattccctctacatacctccgtatccccgagaccagtttcgctcct
gactctttcacagacgcttgcaagtggtccagagcggatgcccagaatggaaagtttcga
gccattcagggatggttccattcgatgatgcatagcatcagactgcacctgcagaacatc
cagctctacaagagcagtatcgaggcggggaataaaggcagcgctcaggaaaccaggaag
aggcggaagctcctgacggacacgagcgagatcggagacaggaggtcgacagcgagggag
gtggagtatatcaaggagttgaggcagcacttgtcgaactttccgaacgcctgccctgtg
ctgaaccttcggagcgggagctggtccttaaaactcccgtttgttcaagaagtcatcgga
cgctcgctacgatcggttcaagtagtgcgcgacccacgggcttggatctatctcatgctc
tacaacagcaagccgagcctttacgccagcaaaaacattcgaaaacacctgctcaacatt
ctgaaccagccgcgtgacagggcaggacagacctgcacgcggtttgatgcagcatttcag
cctttgcgaaagatcctcgctcagccagatgctaacccagtgctcttgctcgcgcatctc
tggctcgctcacacttctgccagcctccgagcgagcgcggacttgccctcacacacctac
ctccaggtgaaatttgaggatatcgtgaactttcccgaagatactgcagaaaagatccac
aggtttattggcgtccctgtttctccggctgctataaaccagctcgcgtttgctacgtcc
acaaatctgtatcacctcatctacgaaggggatatatcacctgcgaaaattaacatgtgg
agagaaaatatggctcctgatcagattagactgatagaacacgtgtgtgggactgtcatg
gacatactcgagtataaaagatga
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