Neoarius graeffei (lesser salmon catfish): 132872784
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Entry
132872784 CDS
T10798
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04218
Cellular senescence
ngra04514
Cell adhesion molecules
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132872784
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132872784
04145 Phagosome
132872784
09143 Cell growth and death
04218 Cellular senescence
132872784
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132872784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132872784
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132872784
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132872784
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Antigens
132872784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
Ig_3
MHC_I_2
Motif
Other DBs
NCBI-GeneID:
132872784
NCBI-ProteinID:
XP_060763848
LinkDB
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Position
24:complement(6309076..6330138)
Genome browser
AA seq
366 aa
AA seq
DB search
MELSSVRMEVLFFLMSFPATPAGAHSVQYLYTAITPPTGFPQFTAVGLVDGEQFVYYDNS
VSKMIPRTAWIQKIRDDDPDHWEKQSQEMQSDQEKLTQLLAAVTIDFNHTNGVHTLQRMF
GCELDDDGTTRGYDQYGYDGEDFINLDLKTLTWTAANDKAAITKEKWESTGAEAQHTKSS
LEKECIEWLRKSVPYGRESLERKVRPEALVFEDYSSFQTAVCHATGFYPKALNITWKKDG
EDVIEGVELGETLPNQDGSFQKRSILTPTDMFPEEHDYTCVVEHSSLEKELVLPVEMIGF
RYDCYFPLDEISDGGSGGGTIDGGSGGGTIAVVCAVVALAASVAGILIWKKNTIHDFRHV
SFTADV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagttccgtccggatggaagtgctgttcttcctcatgagttttcctgcgacc
cctgcaggcgcacactctgtgcagtacctctacactgccatcacaccaccaacagggttc
ccacagttcactgcggtgggtctggtggatggagagcagtttgtgtactatgacaacagc
gtcagcaagatgatcccaaggacggcgtggatccagaagatccgtgatgatgatccagat
cactgggagaagcagagtcaggagatgcagagtgatcaggagaagctcacacagctgctg
gccgcagtaacgatcgactttaatcacacgaatggagttcatacactccagaggatgttc
ggctgtgagctcgatgacgacggcaccactagaggttatgatcagtacggttatgatgga
gaagatttcatcaacctggatctgaaaactctcacctggactgcagcgaatgataaagct
gcgatcactaaagagaagtgggagtcgacaggagctgaggctcaacacacaaagagctcc
ctggagaaagagtgtatcgagtggttacggaaatccgtgccatacggcagagagagtctg
gagaggaaagttcgtcccgaggcgttagtgtttgaggactacagcagttttcaaacagcg
gtgtgtcacgctacaggtttctaccccaaagccctgaacatcacctggaagaaggacgga
gaggacgtgattgagggcgtggagctcggagagacgttacccaaccaggatggaagcttc
cagaagaggagcattctgacacctacagatatgttcccagaagaacacgactacacctgc
gtggttgagcacagcagcttggagaaggagttggtgctgcctgtggagatgatcgggttt
agatacgactgttattttccgctggatgaaatttcagacggaggatcaggtggagggacg
atagacggaggatcaggtggagggacgattgctgtcgtttgtgcggttgtggctcttgct
gccagtgttgctggaattctcatctggaagaagaacacaatccatgacttcagacacgtt
tcgttcaccgccgatgtctga
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