Neoarius graeffei (lesser salmon catfish): 132872842
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Entry
132872842 CDS
T10798
Name
(RefSeq) class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like
KO
K06751
MHC class I antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04218
Cellular senescence
ngra04514
Cell adhesion molecules
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132872842
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132872842
04145 Phagosome
132872842
09143 Cell growth and death
04218 Cellular senescence
132872842
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132872842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132872842
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132872842
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132872842
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Antigens
132872842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
Ig_2
C2-set_2
Ig_3
Psg1
I-set
DUF6479
Motif
Other DBs
NCBI-GeneID:
132872842
NCBI-ProteinID:
XP_060763921
LinkDB
All DBs
Position
24:complement(7640599..7706919)
Genome browser
AA seq
389 aa
AA seq
DB search
MKLFIFVYFASLLGNVGTVTWSSTVPEVLLFLLFSVHPSSAGSHTLQYQYTAVGGINFTE
FTAVGLVDGEQFVFYDTNIKEMIPKTELAQKISADDPDYWNRETKRMREEDDRFRDRLVN
IIQSFNQTQGIHTLQRMYSCKLDGDGTTTGYDLYGYDGEDFMSLDLKTGTLTEANPQAGI
FIKKWDPTDAKAKHCKSYLEDDCIYWLKKFVSYGRETLERKVRPEASVFHKHSPSPEVVC
LATGFFPKALNITWQKDGEDVIEDVELNETLPNQDGSFQKRSILKVPAEELQKHKYTCVV
QHSSLGEENIVREVPKGPIKTTHLDGERTDQVSGRRQIGVVIGVVVVTLFAVVAAVVLWK
KRNSGFRPVPPRPSSEGDSSSKKSTVSSC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtttatttttgtttattttgcctctttgctgggaaatgttgggactgtaaca
tggagctcgacagttccggaagttctgctttttctcctgttttctgttcatccttcatca
gcaggctcacacactctgcaataccagtacactgctgtcggaggaataaatttcacagaa
ttcactgctgttggtctggtggatggagagcagtttgtgttctatgacaccaacatcaag
gagatgatcccaaagacagagttggcacagaagatcagcgctgatgatccagattactgg
aacagggagacaaaacgtatgcgggaagaagatgacagattcagagacagactggttaac
ataattcagagttttaatcagactcaaggaattcatacactccagaggatgtacagctgt
aagcttgatggtgacggcaccactacaggatatgatctgtacggttatgacggagaagat
ttcatgagtctggatctgaaaactggaaccttgactgaagcgaatcctcaagctggaatc
tttataaagaagtgggatcctacagacgctaaagctaaacactgcaagagctacctggag
gatgactgtatttattggttaaagaagtttgtgtcttacggcagagagactctggagagg
aaagttcgtcccgaggcgtcagtcttccacaaacactctccttctccagaggtggtgtgt
ctcgctacaggtttcttccccaaagccctgaatatcacctggcagaaggacggagaggat
gtgattgaggacgtggagctcaatgagacgttacccaaccaggatggaagcttccagaag
aggagcattctgaaagtcccagctgaagagctgcagaaacacaaatacacctgcgtggtt
cagcacagcagcttgggggaggagaacatagtccgagaagtaccgaaaggtcctattaaa
actacgcatttagatggtgaaagaacagatcaagtgtcaggtagaagacagattggagtc
gtcattggtgtggtcgtcgtcactctcttcgctgttgtcgctgctgttgtcctctggaag
aagaggaactctggattcagacctgttccccccagaccctcctctgaaggagattcttcc
tccaaaaaatcaactgtttcttcctgctga
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