Neoarius graeffei (lesser salmon catfish): 132872905
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Entry
132872905 CDS
T10798
Name
(RefSeq) class I histocompatibility antigen, Gogo-B*0201 alpha chain-like
KO
K06751
MHC class I antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04218
Cellular senescence
ngra04514
Cell adhesion molecules
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132872905
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132872905
04145 Phagosome
132872905
09143 Cell growth and death
04218 Cellular senescence
132872905
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132872905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132872905
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132872905
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132872905
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Antigens
132872905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
Ig_2
C2-set_2
C2-set_3
Ig_3
I-set
DUF6479
Podoplanin
Motif
Other DBs
NCBI-GeneID:
132872905
NCBI-ProteinID:
XP_060764005
LinkDB
All DBs
Position
24:9047814..9115994
Genome browser
AA seq
370 aa
AA seq
DB search
MKLFIFVYFSSLLGNVWTVTWSSTVLEVLLFLLFSVHLSSAVTHTLQYQYTAVGGINFTE
FTAVGLVDGEQFVFSDNIKEMIPKTEWAQKIRDDDPHYWDTETEEKRNEYYRLKVRLGRI
METLHQTQGVHTLQRMLGCELHDDGTTTGYSQSSYDGEDFMGLDLETGTCTAVKPQAGKF
TKEWYPTDAKAKYWKSYLANECVDRLKKFVSYGRETLERKVCPEASVFHKHSPSPEVVCH
ATGFFPKALNITWQKDGEDVIEDVEFTKTLPNQDGSFQKRSILKAPAEELQKHKYTCVVQ
HSSLEKDLILEVAEGGGSGGRQTGVVIGVLVALVAVVAAVAVVLWKKRNSGFKPVPPRPS
SEGDSSSNDS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttatttttgtttatttttcctctttgctgggaaatgtttggactgtaaca
tggagctcgacagttctggaagttctgctttttctcctgttttctgttcatctttcatca
gcagtcacacacactctgcagtaccaatacactgctgtcggaggaataaatttcacagag
ttcactgctgttggtctggtggatggagagcagtttgtgttctctgacaacatcaaggag
atgattccaaagacagagtgggcacagaagatcagagatgatgatccacattactgggac
acagagacagaagagaagcggaatgaatattacagactcaaagtcagattgggtcgcata
atggagactttacatcagactcaaggagttcacacactccagaggatgttaggctgtgag
ctccatgatgacggcaccactacaggatattctcagtccagttatgatggagaagatttc
atgggtctggatctggaaactggaacctgcactgcagttaaacctcaagctggaaaattt
acaaaggagtggtatcctacagacgctaaagctaaatactggaagagctacctggcgaat
gaatgtgttgatcgtttaaagaagtttgtgtcttacggcagagagactctggagaggaaa
gtttgtcccgaggcatcagtgttccacaaacactcgccttctccagaggtggtgtgtcac
gctacaggtttcttccccaaagccctgaatatcacctggcagaaggatggagaggacgtg
attgaggacgtggagttcacgaagacgctacccaaccaggatggaagcttccagaagagg
agcattctgaaagccccagctgaggagctgcaaaaacacaaatacacctgcgtggttcag
cacagcagcttggagaaggatttaatcctagaagtagcagaaggtggaggatcaggtgga
aggcagactggagtcgtcattggtgtccttgtggctcttgttgctgttgtcgctgctgtc
gctgttgtcctctggaagaagaggaactctggattcaaacctgttccccccagaccctcc
tctgaaggagattcttcctccaacgactcttaa
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