Neoarius graeffei (lesser salmon catfish): 132873012
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Entry
132873012 CDS
T10798
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00280
Valine, leucine and isoleucine degradation
ngra00650
Butanoate metabolism
ngra00900
Terpenoid backbone biosynthesis
ngra01100
Metabolic pathways
ngra03320
PPAR signaling pathway
Module
ngra_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
132873012 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
132873012 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132873012 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
132873012 (hmgcs1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
132873012 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
132873012
NCBI-ProteinID:
XP_060764171
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All DBs
Position
25:39985793..40015520
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AA seq
526 aa
AA seq
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MFVSPITMPGSLPVSCSATWPKDVGIIAMEVYIPSQYVDQAELEEFDGVGTGKYTIGLGQ
ARMGFCSDREDINSLCLTVVQRLMERNALSYDSVGRLEVGTETIIDKSKSVKTVLMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIQAQWQREGRERLFSLNDFGYMVFHSPYCKLVQKSLARLLLNDFLSHPNPNTES
GPFSGLEAFRDVKVEDTYFDRDVEKAFMKASAEMFEQKTKASLLISNQNGNMYTPSVYGC
LASILAQFTPQQLAGQRIGLFSYGSGLAATLYSIRVTQDATPGSTLDKLVSSLSDIQTQL
DSRKKVSPAVFAESMKLREETHHLANYVPQGSVDDLFPGTWYLTRVDEKHRRYYAQRSLN
EHGPLEAGLLNSVTASEHIPSPVKKMPRIPATTAAPEAIAITNGDH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaagcccaatcacaatgcctggttctcttcctgtgagctgttcagccacttgg
cccaaagatgtgggcatcattgctatggaggtctacattccgtcccagtatgtagaccag
gcagaattggaggagtttgatggtgtaggaacagggaagtacaccatcggtcttgggcaa
gcacgaatgggtttctgctccgaccgggaggacatcaactcgctgtgtctgactgtcgtg
cagcggcttatggagagaaacgctttgtcctatgacagcgtgggaagacttgaggtgggc
acagagaccatcatcgacaagtcgaagtcggtgaagacagtattaatgcagctgtttgaa
gaatcaggaaatacagacgtggagggaatcgatactactaatgcatgttatggaggcact
gctgctcttttcaatgctgtcaattgggtggagtccagctcctgggacggtcgttacgcc
ctggttgtggctggagatatcgccgtgtacgccacaggcagtgccaggccaacaggaggc
gctggagcggtggccatgttggtagggccgaacgcaccactggcatttgatagaggtcta
cgagggactcatatgcagcatgcatatgatttttataagcctgatatggtgtctgagtat
cctgtagtggatggcaagctctccatccaatgctacctcagtgcattggacagatgttac
tctgtctaccgcaataaaattcaagcccaatggcaaagagagggtcgtgagagactgttc
agtcttaatgactttggctacatggtcttccactctccctactgtaaactggttcagaaa
tctctggctcgactgctgctcaacgacttcctctctcatcccaatcccaacacagagagt
ggacccttcagcggcctggaagccttcagggatgtgaaggttgaggacacgtatttcgac
cgtgatgtggagaaggccttcatgaaagccagtgcagagatgtttgagcagaaaaccaag
gcctccctgctcatatccaaccagaatggcaacatgtacacgccatctgtgtatggctgt
ctggcttccattctagcacaatttacacctcagcagctggcaggtcagagaattggcttg
ttctcttatggatcagggctcgctgccacactgtactcgatcagagtgacacaagatgct
acacctggctccacacttgataaactggtttccagtttgtcagatattcagactcaactg
gactcaaggaagaaggtttcacctgctgtctttgcagaaagcatgaagcttagagaggag
acccatcacttagcaaactacgtcccccagggttcagtggacgatttgttcccaggaaca
tggtatttaacacgtgtggatgagaaacaccgccggtattacgctcaacgttccctgaat
gaacacggacctctggaggcagggcttctaaattctgtcaccgcatccgagcacatcccc
agcccggtgaagaagatgccccgcattccagccaccaccgctgcccctgaagcaatcgcc
attactaatggggatcattga
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