Neoarius graeffei (lesser salmon catfish): 132873124
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Entry
132873124 CDS
T10798
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00592
alpha-Linolenic acid metabolism
ngra01040
Biosynthesis of unsaturated fatty acids
ngra01100
Metabolic pathways
ngra01212
Fatty acid metabolism
ngra03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
132873124 (fads2)
01040 Biosynthesis of unsaturated fatty acids
132873124 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
132873124 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ngra01004
]
132873124 (fads2)
Enzymes [BR:
ngra01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
132873124 (fads2)
Lipid biosynthesis proteins [BR:
ngra01004
]
Desaturase
Front-end
132873124 (fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
132873124
NCBI-ProteinID:
XP_060764369
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All DBs
Position
2:complement(55621033..55638304)
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AA seq
445 aa
AA seq
DB search
MGGGGHQGEQLGSAESSSCAQYTWEEVQKHNCRGDQWLVIERKVYNVTEWIKRHPGGRRI
LGHYAGEDATDAFTAFHPDQRFVRKFLKPLLLGELVPSEPSQDHGKNAALMEDFRTLRKQ
LEAQGLFRTSLLFFILHLGHILLLEALSLALLWTFGNGWIITILISVILATSQAQAGWLQ
HDFGHLSVFKNSTWDHLVHKFVIGHLKGASANWWNHRHFQHHAKPNVLSKDPDVNMINIL
VLGNILPVEYGIKKLKHLPYNHQHQYFFLIGPPLLIPVYFNVHILQTMYSQRDWVDFAWY
LSYYARYLMWYVPYYGILGSLVLLTFVRFLESHWFVWVTQMNHIPMDIDYEKHDDWLSMQ
LKATCNVEHSPFNDWFSGHLNFQIEHHLFPTMPRHNYSRAAPQVRELCEKYGIHYQVKGL
WESWCDIVSSLKTSGELWLDAYLHK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtggaggacaccagggtgagcagctggggtcagcagagagcagttcatgtgca
cagtacacctgggaggaagtgcagaagcacaactgtaggggtgatcagtggctggtgatc
gagagaaaagtatacaatgtgactgagtggataaaaagacatcctggaggacgcagaatt
cttgggcactatgctggagaagatgcaacggacgcctttacagccttccatccggatcag
cgtttcgtgcggaagttcctgaagcctctgctgctgggagagttggtgccctcagagccc
agtcaagaccacggcaaaaatgctgctttaatggaagatttccggaccttgcgtaagcag
ttggaggcacagggcttgttccgtaccagtctgctattttttatcctacatcttggccac
attctgctcttggaggctctgtctttagcactcctttggacatttggaaatggctggatt
attacaattctaatatctgtcatattggccacttcacaggctcaggctggctggcttcag
catgactttggccacctatcagtctttaaaaattctacctgggatcatcttgtgcacaaa
tttgtcattggacacctgaagggggcatctgcaaattggtggaaccatcgccactttcag
caccatgctaagcccaatgtgctcagtaaggaccctgacgttaacatgattaacatcctg
gtcctgggaaacattctgcctgttgagtatgggattaaaaagttgaagcacctgccctat
aatcatcagcaccagtacttctttttgattggcccacccctgctcataccagtatacttt
aacgtgcacattttgcaaactatgtattcgcaaagggattgggtggattttgcatggtat
ttgtcttactatgcacgatatctcatgtggtatgttccctattatggaattctgggttct
ttagtgcttctgacatttgtcaggtttcttgagagtcactggtttgtgtgggtgacccag
atgaatcacattcccatggatattgactatgaaaaacatgatgactggctcagcatgcag
ttgaaagctacttgtaatgttgagcattcgccgttcaatgattggttcagtggccatctc
aacttccagattgagcaccatctcttcccaacgatgcctcgccataactatagccgtgcg
gctcctcaagtacgagaactttgtgagaagtatggaattcactatcaggtcaaaggcctg
tgggaatcctggtgcgacattgtcagctctttgaaaacgtctggcgagctgtggctagat
gcctacctccacaaataa
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