Neoarius graeffei (lesser salmon catfish): 132874601
Help
Entry
132874601 CDS
T10798
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132874601 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ngra01007
]
132874601 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132874601 (iars1)
Enzymes [BR:
ngra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
132874601 (iars1)
Amino acid related enzymes [BR:
ngra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132874601 (iars1)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132874601 (iars1)
Prokaryotic type
Other AARSs
132874601 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
132874601
NCBI-ProteinID:
XP_060766893
LinkDB
All DBs
Position
26:20653887..20960990
Genome browser
AA seq
1274 aa
AA seq
DB search
MLKLKLSIMVEPVPESVHFPSEEERVLQFWTEKDCFQECLKQSKNRTKYTFYDGPPFATG
LPHYGHILAGTIKDVVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMG
IAEYNKQCRSIVMRYANEWEVSVKRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLV
YRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVNFPLLEDECVCLIAWTTTPWTLPS
NLALCVNPELIYVKVKDNTTDKVYIMMEARLGALFKSEGEYTILEKFPGKTLKGKQYKPL
FEYFIKCKENGAFSVVLDNYVREEEGTGVVHQAPYFGADDYRVCMEYNIIQRDSAPICPV
DSSGCFTAEVTHFSGQYVKDADKNIIKWLKENGRLVNTSSYKHNYPFCWRSDTPLIYKAV
PSWFVRVECIVDKLLENNDKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVS
DDFEEVVCVGSIAELEQLTGVKVADLHRETIDCLTIPSRCGKGELKRVSEVFDCWFESGS
MPYAQAHYPFENRREFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGL
VLASDGQKMSKRKKNYPDPGVIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDV
FLPWYNAYRFLVQNVLRLHQEEDIKFLYNKNTAKLSDNIMDQWIQSFTQSLIQFFKAEMD
AYRLYTVVPKLVKFVDMLTNWYVRMNRRRLKGESGTEDCVSALETLFSVLFSMCRLMAPF
TPFITELMYQNLRHLIDPASVEEKDAASIHYLMLPQVRESLIDKRIESAVSQMQSVIELG
RVIRDRKTLPVKYPLREVVVIHQDPEALGDIRSLQKYILEELNVRQLTLSTDKDKYGIRL
RAEPDHMVLGKRLKGAFKSVMAAIKELKSEQLEDFQKTGFIIVDGHELHEEDLRLMYTFD
QKSDTATQYEAHSDGQLLVLLDITPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVY
YSSEPAGDYLDKVIQAHSDFIFATTKAPLKLYPVPTNASVIVQEKTQLKGSDLDLTIIKG
AGVSIVPLTGPACAYVNLQVDLNNKQQEGVVLLENPKGDNKLDVEKFKMVCRSIFKLNNG
PLAVFSEATELKNSSDLVALSGKTLCVTSGARPAEKNSSDSLLCPYINLQLINACPAECQ
RGNVGTLLLANPAGQNSLRPTALITETAKVFGLRGRKIKLYTDEELKEEFTETSLKSLNT
KTLYVQVLPTTAEA
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagctaaagctgagcatcatggtggaacccgtacctgagtcagttcactttccc
tcagaagaggaacgcgttcttcaattctggactgaaaaggactgcttccaggagtgtctg
aaacaatccaaaaacaggaccaagtacactttctacgatggaccgccctttgctaccggt
ctcccacattatggccacattctagctggcactatcaaggatgttgtcacaaggttcgct
caccagagcggtttccatgtggataggaggtttggctgggattgtcacggcttgcctgtg
gaatatgagattgataagacactgggaattaaaggaccagaggatgtcgctaagatgggg
atagcggagtacaacaagcagtgcaggagtatcgtgatgagatacgccaatgagtgggag
gtttcagtaaagagaatgggccgttggatcgacttcaagaacgattacaagaccctctac
ccgtggttcatggaaactgtctggtgggtgtttaagcagctctatgataaaggtctggtg
tacagaggagtgaaggtcatgccattctccacagcctgtaacacaccactctccaacttc
gaatcacaccagaactacaaggacgttcaggatccatccgtcattgtgaacttccctttg
ctggaggacgagtgtgtgtgcttgattgcatggaccaccacaccgtggactctgcccagt
aaccttgcactgtgtgtaaaccctgagctcatctatgtcaaggtcaaagacaacaccact
gataaagtgtacatcatgatggaggccagacttggggcactgttcaaatctgagggtgaa
tacaccatcctggaaaagtttcctggcaagacgctgaagggaaaacaatacaaacctctt
tttgaatacttcatcaagtgtaaagagaacggagccttttctgtcgtgctggataactat
gtccgtgaggaggagggtacaggagtggttcatcaggcaccctactttggagctgatgat
taccgtgtgtgcatggaatataatatcatccagcgagactcggcacccatctgccctgtg
gattcatcaggctgtttcaccgctgaggtcacacacttctccggccagtatgtgaaggat
gcagacaaaaacatcattaagtggctgaaagagaacggacggctggtgaacacaagctct
tataaacacaactaccctttctgctggaggtctgacaccccgctaatctacaaagctgtg
cccagctggtttgtgagagtcgaatgcatagtggataaacttctggaaaacaacgacaaa
tgctactgggttcctgagtttgtgagggagaagcgatttgggaactggctcagagatgct
cgagactgggccatctcccgtaaccgctactgggggacaccaattcctctgtgggtcagc
gatgactttgaagaggtggtgtgtgtgggctccattgctgagctggagcagctgacggga
gtgaaggttgcagatctgcacagagaaaccatagactgcttaactatcccatcgcgctgt
gggaaaggcgagctcaagagggtctccgaggtctttgactgctggtttgagagcggcagc
atgccttacgcccaagcgcactacccttttgagaacaggcgcgagtttgaggacactttt
cctgccgacttcatcgcagaaggcatcgaccagaccagaggatggttctacacgttgctc
gtgctctcaacggcgctcttcgggaagcctccattcaagaacgtgatcgtcaatggcctt
gtcctcgcaagcgacggccagaaaatgagcaaacgaaagaagaactacccagacccagga
gtgatcgtacagaactacggtgccgacgcactccggctgtacctaatcaactctccggtg
gtccgagcagaaaacctgcgctttaaagaggaaggcgtaagggacgtgctcaaagacgtt
ttcctgccctggtacaatgcttaccgcttcctcgtgcagaatgtcctgaggcttcatcag
gaagaggacattaagttcctgtataataaaaacactgccaagctgagtgacaacatcatg
gaccaatggatccagtccttcacgcagtccctcattcagttctttaaggctgagatggat
gcctacaggttgtacacagttgtgcctaagctggtgaagtttgtggatatgctgacaaat
tggtacgtgaggatgaaccgcaggcgtctgaagggtgagagtggaaccgaagactgtgtc
tcggctttggagaccctctttagtgtgctgttctccatgtgcaggctgatggctcctttc
acgcccttcatcactgagctgatgtatcagaacctgcgtcacctgatcgaccctgcctca
gtggaagagaaagatgcagccagcattcactacctgatgctccctcaagtcagggaatcg
ctgattgacaagcgcatcgagagcgcggtatcccaaatgcagtccgtcatcgagctgggc
cgagtgatccgagaccggaaaactctccccgtcaagtatcccctcagggaggtggtggtc
atccatcaggaccctgaggctcttggagacattcggtccctgcagaaatacattctggag
gagctgaacgtgcgccagctcaccctctccacagataaagataaatacggcatccggctg
cgggccgagcctgaccacatggtgctcggaaagaggctgaaaggagcgttcaaatctgtc
atggctgccatcaaggaactgaagagtgaacagctggaggacttccaaaaaacgggtttt
atcatagtggacggacacgagctgcatgaggaagatttgcggctgatgtacaccttcgat
cagaaatcggacaccgccacacaatacgaagcccattcagatggacagctcttggtgctc
ttagacatcactcctgatcagtcgatggtggatgaaggcgtggctcgagaagtcataaac
cgcattcagaaactgcgcaagaagggtcatctggtcccatctgacgaaatcacggtgtac
tacagctcagagcctgcaggtgattaccttgacaaagtgatccaggctcattcagacttc
atctttgccactacaaaggctcccctaaagctttatcccgttcccacaaacgccagtgtg
atcgtccaagagaaaactcagttgaagggttccgacttggatttgaccatcattaaggga
gcgggggtctccatagtgcctctcactggccctgcatgcgcttacgtcaacctccaagtc
gatctcaacaacaaacaacaagaaggagtggttctgctggaaaatcccaagggagacaac
aaactggacgtcgagaaatttaagatggtttgccgcagcattttcaaactcaacaacggt
cctttggctgttttcagtgaggctactgagctgaagaacagcagtgatctcgtggctctg
agtgggaagactctgtgtgtgacgtcaggagctcgtcctgcggaaaaaaatagctccgac
tctctgctgtgtccttacatcaacctacaactcatcaacgcatgtcctgcagagtgccag
aggggcaatgtcggcacgttgctgctcgctaatcctgcgggccaaaacagcctccgtccc
acggccctgatcactgaaactgctaaagtgttcggtctgagaggaaggaagattaaactc
tatacggatgaggagcttaaagaagaattcaccgagacgtctctgaagagcctgaacacg
aagactctgtatgtccaagttctccccacaactgcagaagcgtag
DBGET
integrated database retrieval system
