Neoarius graeffei (lesser salmon catfish): 132874732
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Entry
132874732 CDS
T10798
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04140
Autophagy - animal
ngra04144
Endocytosis
ngra04620
Toll-like receptor signaling pathway
ngra04621
NOD-like receptor signaling pathway
ngra04622
RIG-I-like receptor signaling pathway
ngra05132
Salmonella infection
ngra05168
Herpes simplex virus 1 infection
Brite
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132874732 (traf6)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132874732 (traf6)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
132874732 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132874732
NCBI-ProteinID:
XP_060767096
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All DBs
Position
27:34735881..34764613
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AA seq
530 aa
AA seq
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MACGDMHKSNPDEYPFSRCMADMEKESYLSPTENPSTLSVSSSVQAEQQGYDVEFDPPLE
SKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLTEDQLFPDNFAKR
EILSLTVRCRNVGCNEKMELRHLENHLKLCKFATIPCLQCQEHVWKNSIEEHMNQDCLHR
PITCPDCAERIIYADKQFHEQMCPFVNTACEYCNMEFIRGQLSSHCATDCLKAPVACTFS
MFGCQEKMPRNDLARHMQDFTQMHMRYMAEFLRNQTMNGIPPSCSTPPSEPPRVAEPCQC
NQDMQQLRETVVELEGRLVRQDHQIRELSIRNDTQHTQVTELRKKLALLEENMHELEAQQ
YQGIYVWRIEGFSGHLHQQEAGQPVVLHSPPFYTGRPGYKVCLRLHLQTPSAPRCSNYIS
LFVHTMQGVFDSQLPWPLQGTIQLAVLDQAEGQHHVEVMETKPDLQAFQRPTVPRNPKGF
GYVTFMQLQALRQRGFVRDDVLLVRCEVMPRFDTSLRREGVQPRGPEPSL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtggtgacatgcataaatccaatcctgatgagtatccattctcaagatgtatg
gctgacatggagaaggagtcgtacttgagcccgacagaaaacccatccacacttagtgtc
tcctccagtgtccaagcagaacagcaaggctacgatgttgagtttgaccccccactagag
agcaagtatgagtgtcccatctgtctgatgggtctaaggtcagccgtacagacaccatgt
ggtcatcgcttctgcaacagctgtattaagaagtccatcagggacacggggcaaaaatgt
ccagttgacaatgaagtgctgacggaggaccagctttttccagataactttgccaagagg
gaaatcctgtctctcacagtgcgctgccgcaatgttggctgtaacgagaaaatggagctc
agacacttggagaatcatttgaagctctgtaaatttgccacaataccttgcctccagtgt
caggagcatgtatggaagaatagtatagaggaacatatgaaccaggactgtttacatcgc
ccgatcacatgccctgactgtgccgagaggattatctatgctgacaaacagtttcatgag
cagatgtgtccctttgtgaatacagcgtgtgagtactgtaacatggaattcattcgcggt
cagttgtcatcacactgtgccacagactgcctgaaagctcctgttgcttgtactttcagc
atgtttggttgtcaagaaaagatgccaaggaatgacctggcccgtcacatgcaggatttt
acacagatgcacatgcgctacatggctgagtttctgcggaaccagactatgaatggcatt
cccccttcatgttcaacccctccatctgaacctcccagggtggcagagccatgccaatgc
aaccaggacatgcagcagctacgagagactgttgtggaactcgagggccgccttgtgcgc
caggatcaccaaatacgggagctgagcattcgcaatgatacacagcatacacaggtgacc
gaactacgtaagaaactggcgttgctggaagagaacatgcacgagctggaagcacagcag
taccagggcatctatgtatggcgaatagagggattttcaggtcacctgcaccaacaagag
gctggacagccagtcgtactccatagcccgccgttttacacgggaagaccaggctataag
gtttgcctgcgactgcacctgcagacaccaagtgcaccacgttgctctaactacatctcg
ttatttgtgcatacgatgcagggtgtgtttgacagccagctcccgtggcctctgcagggc
accatccagctggctgtgctggaccaggctgaaggccaacaccacgtcgaggtaatggag
accaaaccagatttgcaggccttccaaaggcccacagtgccgcgcaaccccaaaggcttt
ggctacgtcaccttcatgcagctgcaggcactgcgccagcgaggctttgtcagggacgac
gtgctgctggtgcgctgcgaggtcatgccgcgcttcgacaccagcctcaggagagagggc
gtgcaacctcgaggacctgaaccatctctttga
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