Neoarius graeffei (lesser salmon catfish): 132876143
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Entry
132876143 CDS
T10798
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ngra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132876143 (dse)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
132876143 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
Tim54
Motif
Other DBs
NCBI-GeneID:
132876143
NCBI-ProteinID:
XP_060769421
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Position
2:complement(172932..206595)
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AA seq
931 aa
AA seq
DB search
MMSSYTRGAPTVFFISAVCVLARSDWEPSGGEVPFIGGRYSEHPMLYFGREAVPELRGAA
VSTHAELAQQVWRAGEDMLANPTHFLPPRDPEQFSARWNEIYGNNLSVLALFCLLYPQRT
GALSLAREYMDRMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLFEFLSEAEQERYLQV
LGNASFYMYDKSLQRGWSFQFLHNHQPTNCVALLTASLILLNQGCLQEAYVFVQQVMAIM
EKALVVLHSVVDGSLYEGVAYGTYTTRSLFQYIFLLQRHFNISHFTHPWLLKHFDFLYRT
LLPGFQRNVAIGDSNYNWFYGPESQLVFLDRYVMRNGHANFLAEQIRRHRVQDGPGHPSR
GQKWCTLHTEFIWYDAGLKATPPPDFGMPRLHYFEDWGVVTYGGGLPAGTNHSFLSFKSG
KLGGRTIFDIVHQRHYSEWIRGWKNFNAGHEHPDQNSFTFAPGGFPFITEALYGPKYTLL
NNAVLFAPSTDHACFSPWEGQVTEACDSKWSKYKYSAAADCEGRVEAALERQGVVFIRGE
GRAAYSPALKIKNLQRNLVLLQPDLLLLLDHVHLDAESPAHSISAFFHNIDFPFQHTMAR
DGVHGAFVLHGQDEYTMLWKDDTGYSSEADTMYWTYPHGYPYNGSHYVNVTMSLRFPHTR
IAYVFFGPNVDVLSFSLHGDSERIDVHLTTPEHAFTVHILTSENPSKPLFAMVLKDKSEK
VVFERVAAVQEHPLEEVQGYVNLVEQNLQHIKPVFQQLKHHVKMRILNAEGFHKITERLK
KTSEKRRKVKKVAAAVEKMFSVNKKPGKVKGSKKATGNEAGEKQQGELRRESNWNEGDVH
RGKKPRIIKGHMFKDIHTAVAVGGTKASISVSYIRLFLVLNIGAFILLLAVLLTQLRRAP
SLHTQRCIYCILLLDSFILLGLYSSCSHGHC
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcatacacacgcggtgcccccacagtgttcttcataagtgctgtgtgtgta
ttggcgcgcagcgactgggagccaagtggtggtgaagtgccctttattggagggcgctac
tctgagcaccccatgctgtattttgggcgggaggcagtgcctgagctgcgaggggcggcg
gtgagcactcacgctgagctggctcagcaggtatggcgtgctggtgaagacatgcttgca
aaccccacccattttcttccaccacgagaccctgaacagttctccgcccgctggaacgaa
atctatgggaacaatctgagcgtgttagcactcttctgtctgctttacccacaacgcact
ggggcgctcagtctggcccgcgagtacatggaccggatggccgctcagcccagctggctg
gtaaaggatgctccatgggatgaggttccgctggctcattctctggtgggatttgcgaca
gcgtatgactttctgtttgagttcctgagtgaggcggagcaggagcgttacctgcaagtg
cttggaaatgcttccttctacatgtacgacaaatcactgcagagggggtggagcttccag
ttcctccacaaccaccaaccaaccaactgtgttgccctgctgactgcctctctcatcctg
ctgaaccaggggtgtctacaggaggcctatgtatttgttcagcaggtgatggcgattatg
gagaaggcgctggtcgtgctgcattctgtggttgatggttctctgtatgaaggtgttgcg
tacggaacctacactacacgttctctttttcagtacatcttcctgctgcagagacacttc
aacatctcgcacttcacacacccctggctcctcaaacattttgatttcctctacaggaca
ctactgccaggtttccagaggaatgttgccatcggtgactcaaactacaactggttttat
ggcccagagagtcagctggtgttccttgatcgctacgtcatgaggaacggccatgctaac
ttcctggctgaacagatccgacgccaccgtgtgcaggacggaccgggacacccgtcacgg
ggacagaaatggtgtacattacacacagagttcatctggtatgatgctggtctcaaagcc
acgccccctccagattttggaatgccacgtttgcactattttgaggactggggtgtggtg
acatacggaggcggtctacctgcagggacaaatcattccttcttgtcatttaagtcaggg
aaactgggtggccgcaccatcttcgacatcgtgcaccagcggcactacagtgagtggatc
cgcggctggaagaacttcaatgccggacacgagcatcccgaccagaactcatttaccttt
gcacccggaggtttccccttcattactgaagcattgtatggccccaagtacacactcctt
aacaacgctgttctgttcgcaccctccactgaccatgcctgcttctcgccatgggaaggt
caggtgactgaagcatgtgactccaagtggtcgaagtataagtacagtgctgcagcagac
tgcgagggtcgtgtggaggcagcactagagcgtcagggtgttgtgttcatccgcggcgag
ggacgggcagcatacagcccagcgctgaagatcaagaacctgcagaggaaccttgtcctt
ctccagcctgacctcctgctgctcctggaccatgtgcacttggatgctgaaagtcctgcc
cacagcatcagcgccttcttccacaacatagacttccccttccagcacaccatggcgaga
gacggtgtccatggtgcttttgttctgcacggacaggacgagtacaccatgctgtggaag
gacgacacgggctacagctcagaagctgatacaatgtactggacgtacccacacggctac
ccctacaacggctctcactatgttaatgtgactatgtcgctacgcttcccacacacccgc
atcgcctatgtgttctttggcccgaatgtcgatgttctcagcttcagcctgcatggagac
tccgagaggatcgacgtccacctgaccacaccagaacacgccttcactgtccacatcctg
acatcggagaaccccagcaagcccctgtttgccatggtgctgaaggacaagtcagagaag
gtggtgtttgagagggtggcggcagtgcaggagcaccctctggaggaggtgcagggctat
gttaatcttgtggagcaaaacctccaacatatcaaacctgtcttccaacagttgaagcac
catgtaaagatgcgcatcctaaatgctgagggattccacaaaatcacagaacgactaaag
aaaacctcagaaaagaggaggaaggtgaagaaggtggcagcagctgtggagaagatgttc
tcagtcaataagaagccagggaaagtgaaggggtcaaagaaagcaactggaaatgaagct
ggagagaagcaacagggagagctgaggcgcgagagcaattggaatgaaggtgatgtgcac
aggggcaagaagcccaggatcataaaaggacacatgtttaaagacatccacactgcagtg
gctgtgggtgggaccaaagcatccatctctgtctcctacatacgtttgttcctggttctg
aacatcggagccttcatcctgctgctggcggttctgctcacacagctgcggcgagcgccg
agtctccacacgcagcgctgcatctactgcatcctgcttcttgacagcttcatcctgctc
ggcctctactcatcatgctcacacggacactgctga
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