Neoarius graeffei (lesser salmon catfish): 132881618
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Entry
132881618 CDS
T10798
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04115
p53 signaling pathway
ngra04210
Apoptosis
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132881618 (apaf1)
04115 p53 signaling pathway
132881618 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132881618 (apaf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
APAF1_C
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NB-ARC
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
CARD
CFAP251_N
NBCH_WD40
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
ASA1
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
eIF2A
PD40
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_like
Beta-prop_RSE1_2nd
PEP5_VPS11_N
WD40_RFWD3
Tricorn_N
CARD_2
PAC11
AAA_16
WHD_Dark
Motif
Other DBs
NCBI-GeneID:
132881618
NCBI-ProteinID:
XP_060770271
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All DBs
Position
2:complement(44219306..44362750)
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AA seq
1254 aa
AA seq
DB search
MEEQARSCLLRSRTTLEQDIKASFLMDHMISDGVLTGDEEENILSKSTRKEQAAALLEVL
LRKDNRAYISFYNALIRESYGDLAALLHSDLPQLSPEGEKSYFNGISPSVQAILSEGGVP
QRPVVFVNRPDLLNLLREKLRQLQKTPGWVTVFGMAGSGKSVMAAEAMRDGALIRECFPG
GVHWLSVGQCEKADLLVRMQSLCFRLEQGQSSEACLRPPSSVEEAKERLRFLLLRRFPRS
LLILDDVWDSYTLRAFDIQCRVLLTTRNSSLTDSVSGYRFEVHVESGLDEEKALEILALY
VNGRVPNLPEEARSIVKECKGSPLVVSLIGALLGDFPDRWGYYLEQLRKKRFRRIRKSSS
YDYEALDQAMDASLQVLEGEHRELYKDLSVLEKDVKVPAKVLSVVWGLELEEVEDVLQEF
VNKSLLFRDCNQRPYRYFLHDLQLDFLTEQNRSQLAELHAKVVCQYQKAYSNTPPLSGDV
EGLYWYRFLPYHMARAGLSKELYSLMFSLDWVKNKAQVMGSAHLINDYVEYGEILDKENS
QVRLQFQEFLSLNGHQLEERPFPDVVQLALAQPHSSEVYRQAFLQAQERASRGQLYLDWV
NKSSLESLSRLVLHPHQNSVYYACFSRDGRKIASCGASKTLRVFKSTSGEKVQEIQAHDE
EVLCCAFSPDDRQIATCSSDRKVKIWNLEKGTQVRVFDVEHEEQINHCQFTNTNRRILLA
TSSNDKITNTKVWNMNRKSSQNTMFGHTDGVNHCCFSPDDAYLATSSNDGTLKLFEMTTA
NEWQSIDITSLFPESDEGSVSVKCSTWSADGKRIIGAAKNAVFVFDVATLDMLLEIRTSR
VSTVQYCDACPNSPLLALALSHYTVELWDFEANKKRAECSGHLSWVPCVQFSPDGSLLLS
ASDDQTIRLWKTKDVHTSSAVALKRDFDVLFSQEDITVAAADSQNGLQVRSGLDGRVVFK
TARQKSRIRCVCICRQTRTVALGLEDGSMQVLEVPSGNTLATLHGHTKTVHHCVFTDDGQ
TIITSSEDTTIQVWRWTTGQCLILEGHKEPVRKFHLLNSSSALLSWSFDGTVKVWDLKSG
EKLQDLKCHQGAVLSGDVSPDGHLFTTTSADKTAKVWSCSSWKMQFFLQGHKACVRSCRF
SWDNKRLATGDDNGEIRLWNILNGNLLKICSRESKDSMDSFHGGWVTDLHFSPDNKVLVS
TGGYVKWWSVDRGEALQTFYTTGNNLKRICVSSDFRTFVTIDNIGILYILKQVE
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaggctcgcagctgcttgctgcgctccaggacaaccctggagcaggacatc
aaggcttccttcctcatggaccacatgatcagtgacggggtgctgaccggagatgaggag
gaaaacatactcagtaagtccaccagaaaggagcaagcagcagcgctgttggaggtacta
ctgcgcaaagacaacagggcgtacatctccttctacaacgcgctgatccgagagagctat
ggagacctggctgctctgcttcacagtgacctgccgcagctcagccccgagggggaaaag
agctactttaacgggatctctccctcagtgcaagcgatcctgagcgagggtggcgtgccc
cagaggcctgtggtgtttgtgaaccgtcccgacctgctgaacctgctccgggagaagctg
cgccagctgcagaaaactcctggatgggtcaccgtgttcggcatggccggatcagggaag
tccgtcatggccgccgaggccatgagagacggagcgctgatcagagagtgttttcctggt
ggagttcactggctgtcagttgggcagtgtgagaaagcagatctcctggtgaggatgcag
tctctgtgctttcggctggagcagggtcaaagttcagaagcctgcttaagaccgcccagc
tcagttgaggaggccaaagagcgcttgcgcttcctcctgctgcgtaggtttcccagatct
ctgctgatcctggatgatgtgtgggacagttacacactccgggcgtttgatatccagtgc
cgagtgctcttgaccacgaggaacagcagtctgactgactcagtgagcggttataggttc
gaggtgcatgttgagagcggtctggacgaggagaaggctctggaaattctcgctctgtat
gtaaacgggagagtgccgaatcttccagaggaggctcgcagcattgtgaaagaatgcaaa
ggctctcctctggtcgtatctctgatcggggcgctgctcggagactttcctgaccgctgg
ggctactacctggagcagctgagaaagaagagattccggcgcatacgcaagtcttcctct
tacgactacgaggccttggatcaggccatggatgcgagtctgcaggtccttgaaggagaa
cacagagagctctacaaagatctgagcgtgctggagaaagacgtcaaagtgcctgccaag
gtgctttctgtggtgtggggtctcgagctggaggaagtggaagatgtcctccaggagttt
gtgaataaatctctgttgtttcgggattgtaatcaacggccatatcgctatttcctacac
gacctacagctcgacttcctcacagagcaaaaccgcagtcagttagcggagctgcatgct
aaagtggtctgtcagtaccagaaagcatacagtaacaccccacccctttcaggagatgtg
gagggattatactggtatcgcttcttgccgtatcacatggcacgggcgggcctgtccaag
gagctttattccctcatgttttcactagactgggtgaaaaataaggctcaggtaatggga
tctgcccacttaatcaacgattacgtggagtatggggagattctcgataaagagaacagc
caggtgaggctgcagttccaggagttcttgtctttgaacggccaccagttggaggagagg
cctttccctgacgtggtgcagctggcgctggctcagccgcactcctctgaggtctacaga
caggcttttctgcaagcacaggagagagccagcagggggcagctctacctggactgggtg
aacaagagcagtctagagagtctgtcacggctcgtgctgcaccctcaccagaactccgtt
tactatgcgtgtttctctcgagatggccgcaagatcgcctcctgcggggccagcaagacg
ctgcgggtgtttaagagtacctctggagagaaggtccaggagatccaggctcatgatgaa
gaagttctgtgttgtgcgttctcccctgacgaccgacagatagcaacctgctccagtgac
aggaaggttaagatctggaatttagaaaaaggcacgcaggtgcgtgtgttcgatgttgag
cacgaggagcagattaaccactgccagttcaccaacacaaaccggcgcatcctgctggcc
accagttccaacgacaaaatcaccaacaccaaggtatggaacatgaacaggaaatcatct
cagaacaccatgttcggacacacagatggcgtcaatcactgctgcttctctccggacgat
gcctatcttgccacctcatcgaacgatggaacactgaagctttttgagatgaccactgca
aacgagtggcagtctatcgatatcaccagtttgtttccagagagtgatgaagggagcgtt
tctgtgaagtgcagcacgtggtcagctgatggcaagcgcatcataggtgctgcaaagaat
gcagtctttgtatttgatgtagcgacactggatatgttgttggagatcaggaccagtcgt
gtaagcacagtgcagtactgtgacgcctgtccgaacagtccactactagccttagcactg
tcacactacacagtggagctgtgggactttgaggctaataagaagagggctgaatgcagt
ggtcacctgagctgggtgccttgtgtgcagttctctcctgacggctcactcctcctttca
gcctctgatgaccagaccatcagactgtggaagaccaaggatgtgcacacatcttcagcc
gtggctctgaagagggactttgatgttctcttcagtcaggaggacataacagtggcggca
gctgacagccagaacgggttacaggtgcgttcgggcctagacggaagggtcgtgttcaag
actgcaagacagaaatcgaggattcgttgcgtgtgtatctgcaggcagacgcgtactgtg
gctctgggcttggaggatggtagcatgcaggtgctcgaggttccctctggtaacacttta
gcaacacttcatggtcacaccaaaactgtgcaccactgcgtcttcacagatgacggacaa
accatcatcacatcctcagaagatacaacaatccaggtgtggcggtggacaacaggacag
tgtctgatcttagaaggccataaggaaccagttagaaagtttcatcttctgaactcttcc
tctgctttgctctcatggtcatttgatggcactgtaaaggtgtgggatctgaagtcagga
gagaagctccaggatctgaagtgccatcaaggtgctgttctgtccggtgatgtatctcct
gatggacacctcttcaccaccacttcagcagacaagacggcgaaggtgtggagctgttca
tcatggaagatgcagttcttcttgcaaggccacaaagcatgtgtacgcagctgccggttc
tcatgggacaacaagcgcctcgctactggggatgataacggcgagatcaggctatggaac
atattgaatggaaacctgctgaagatctgctcccgggagagcaaggactcgatggattcc
ttccatggaggctgggtgactgatttgcacttctctcctgataacaaggtcctcgtatct
actggaggatacgtcaagtggtggagtgtggacagaggagaagccctgcagaccttctac
accacaggaaacaacctgaagcgcatctgcgtctcgtccgacttcagaacattcgtcacc
atcgacaacatcggcatcctgtacatcctgaagcaggtggaatga
DBGET
integrated database retrieval system
