Neoarius graeffei (lesser salmon catfish): 132887453
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Entry
132887453 CDS
T10798
Symbol
nr1h4
Name
(RefSeq) bile acid receptor
KO
K08537
farnesoid X receptor
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132887453 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ngra03310
]
132887453 (nr1h4)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132887453 (nr1h4)
Nuclear receptors [BR:
ngra03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
132887453 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132887453
NCBI-ProteinID:
XP_060778912
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All DBs
Position
6:48591233..48626461
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AA seq
485 aa
AA seq
DB search
MNEWVGPDVNVVGPLQMPPNDGFSLPEGSHFFDILAEQSSPLLQDQEVLPFGSFPSMQYS
TMEQSMSSPSYYSNQPYYPQYSTEEWCSPSSMLELRKGPLEGNFEAEIEALTPVVPTVYK
KPRHAAHSGRFKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKTPKNSSEDGTGDDTEMGDSG
DTKQVTSTTKTSKEKVELSQDQQALLNDILNAYNRHHIPPDMAKKLLQEQFSTEENFLLL
TEMATSHVKVLVEFTKNIPGFQALDHEDQIALLKGSAVEAMFLRSAQAFTKKLPHGNPEV
LEERIRKSGIPEQFTIPMFNFYKSIGELQMIQEEHALLTAITILSPDRPYIRDQQTVEQL
QEAMLEVLRKVCKLKHPQEPQHFARLLGRLTELRTLHHHHAEMLESWRTSDHKFNPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtaggccctgatgtcaatgttgtgggacctctgcagatgccaccaaac
gatggcttctccctgccagagggctctcacttctttgatattctggcagagcagagcagc
cctctgcttcaggaccaggaggtcttgcctttcggcagctttccaagtatgcagtactcc
acaatggagcaatccatgtcctcgccatcgtactactccaatcagccctactatccccag
tacagcacagaagagtggtgttccccgtcctccatgctggaactaaggaagggcccactg
gagggaaactttgaggcagagatcgaggcgctaactcctgttgttcccactgtgtataag
aaacccagacatgctgcccattcaggcaggttcaaaggagaagaactgtgtgtcgtgtgt
ggggacaaagcctcggggtaccactataacgctctcacatgcgaaggatgtaaagggttt
ttcagaagaagtataacaaagaacgcagtatataagtgtaaaagtggagggaattgtgag
atggacatgtacatgcgcagaaagtgccaagagtgccgactccggaagtgcaaggagatg
ggaatgcttgcagaatgtttgctcacagagatccagtgcaagtccaaaagactaaggaaa
acccccaagaattcatcagaagatggtacaggagatgatacagagatgggagacagtgga
gatactaagcaggtcacatccacaacaaaaacctcaaaagaaaaagtggagctcagtcaa
gaccagcaggctttactaaatgatattcttaatgcatacaacaggcatcatattcctcca
gatatggccaagaaactgctccaagaacagttcagcacagaggagaatttcctccttttg
accgagatggcaaccagccatgttaaggtcctggtcgagttcaccaaaaacatcccaggg
ttccaggctctggaccacgaggatcagatcgctctactaaagggttccgcagttgaggcc
atgttcctgcgttcagcccaggccttcaccaagaagctgcctcatggaaacccagaggtg
ttggaggagcgaatcagaaagagcggtatacctgagcagtttaccatccccatgttcaac
ttttataaaagtattggagagctgcagatgatacaagaggaacatgctctcctcacagcc
atcactatcttgtccccagaccggccctatattagggaccagcagactgtggagcaactc
caggaagccatgctagaggtgctgagaaaggtctgcaagctaaagcaccctcaggagcca
cagcattttgcccgattgctcggccgactgaccgagctgcgcactctgcatcaccaccat
gctgagatgctggagtcatggcgaacgagtgaccacaagtttaacccgctgctttgtgag
atctgggatgtacagtga
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integrated database retrieval system
