Neoarius graeffei (lesser salmon catfish): 132887875
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Entry
132887875 CDS
T10798
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04260
Cardiac muscle contraction
ngra04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132887875
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
132887875
04261 Adrenergic signaling in cardiomyocytes
132887875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132887875
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132887875
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Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
DUF2201
DAO_C
VWA_CoxE
YfbR-like
Motif
Other DBs
NCBI-GeneID:
132887875
NCBI-ProteinID:
XP_060779609
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Position
6:complement(38618393..38915815)
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AA seq
1080 aa
AA seq
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MARGMSPGSPLTPLIIVLACSALHGSRASQFPTAAIIKEWVDKMQQELVTLADTASAGKS
LGEIFMNNQKYYTVEANYAKRLVDNAARNIENFLKKRAKALEALATAAERFQMEHQWKDD
FGENDIIYYNAKDNLDVNVTEGNKNRIQPEFKEDPAFKNRLVSYNHTAVHIPTDIYDGST
IVLNELNWTEALDDVFKKNKEEDPTLLWQVFGSATGLARYYPASPWKDARKTPSKIDLYD
VRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVNFNTK
VNNTACFRHLVQANVRNKKILKDAVKNITAKGITNYTKGFEFAFNQLSDQNVTRANCNKI
IMLFTDGGEERAQEIFQRYNKNKEVRVFTFSVGQHNYDTGPIQWMACNNKGYFYEIPSIG
AIRINTQEYLDVLGRPMVLADAKEVQWTNVYLDALELGLVITGTLPVFNKTKSGENSSRI
QRQNQLILGVMGVDVSLDDIKRLTPHFTIGPNGYYFAIDPNGYVLLHPNLQPKNAKFQEP
VTLDFLDAELENDIKVDIRTMMIDRVPGERKIETLVKSQDERYIDRGVRTYTWVPVNGTD
YSLALVLPEYNMHYIQAKLGDIKQAMSSDTMQMENFDDYGYTFIAPREYCQDLKLSTNNT
QFLMDVNEYIGSRTPSDPLCNVTLLNRLLLDANLTAELVNLWKKQSVEGVLARFVATDGG
ITRVYPKSAGEEWTEDALTFESSFYKRSLDNNIYIFTAPYVNKSRESSYESGILVSKAVE
LDFNGNKLKPAVVGVKLNVSAWMNSFMNATIKMNCKDEICGCLRNDKQVDCAILDDGGFL
LMSNQDEYITQIGQFFGEVDPILMASLLNKSLYSFNKTYDYQSVCDPEKEPKAAAGPRSA
YVPTMADMLSLGWWASTAAWSMLQHFLVSLTFPSFLHAEEDNSDAYSKESCITEQTQYFF
ANDDRSFSSTVDCGNCSRMYRAEKLPSTNLVFLITDAKSTCLTCDTNPVRQAEQPSTGPD
PCILAQKPRYRKGPSVCFDRNITEDASDCGSGSSLVPSLWPVLTLQLLLFWLLTGTGCCS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgggatgagcccgggatcgcccctcactccgctcatcattgtgctcgcgtgc
tcggcgcttcacggctcgcgcgcctcgcagttccccacggcggccatcataaaggagtgg
gtggataagatgcagcaggagctggtgaccctagctgacacggccagtgcgggaaaaagc
cttggagagatctttatgaataatcagaaatactacactgtggaagcaaactatgcaaaa
aggctggtggataatgcagcacggaacatcgagaactttttaaagaagcgagcaaaagca
cttgaggctttggcaactgctgcagaacgcttccagatggagcatcagtggaaagatgat
tttggcgagaatgacatcatctattataatgccaaggacaaccttgacgtcaatgtaacc
gaaggaaacaaaaaccggatccaaccagaatttaaagaagatccggcttttaaaaaccgt
ctcgtgtcctacaaccacacggctgtgcacatccctacagacatatatgatggctccact
attgtgttaaatgaactgaactggactgaagcactggatgatgtttttaagaagaacaag
gaggaagacccgactttactctggcaagtgtttggcagcgctacaggactggctcgctac
taccctgcctctccatggaaggatgccagaaaaacgccgagtaaaatcgatctctatgac
gtccgccgcagaccctggtatgttcagggcgctgcctcaccgaaggacatgctcattctg
gtggacgcgagcggaagcgtgtctggattaactctgaaactcatccgaacgtccgtcagt
gagatgctggagactctctcagatgatgactatgtcaacgtagtgaattttaacacaaaa
gtgaacaacaccgcatgtttcagacatctggtccaggccaacgtccgcaataaaaaaatc
ttgaaagatgcagtgaagaacattacagctaaggggataaccaactacacaaagggcttt
gaatttgccttcaatcagctctcagatcagaatgtgacgagagccaactgcaacaagatc
atcatgctgtttactgacggaggagaggagagagctcaggagatctttcaaagatacaac
aaaaataaagaggtgcgtgtcttcaccttctctgttggccagcacaactatgacacagga
cctatacagtggatggcttgtaacaataaaggttacttctatgaaatcccttctattgga
gcaatccgcataaacacacaggagtatttggatgtcctgggtagacccatggttctggct
gatgctaaagaggtgcaatggaccaacgtttatctggatgccttggagctgggtctggtc
atcacaggcactctacctgtcttcaacaagactaaatctggagaaaacagctcacgcatc
cagcgccagaaccagctcattcttggtgtgatgggtgtggatgtgtctctggacgatatt
aaaagactgacgccgcactttacgattggcccgaatggatattattttgcgattgatccc
aacggctatgtgctgctccatccgaacctccagcctaagaatgccaaatttcaggagcct
gtcactctggacttcctggatgctgagctagaaaatgatattaaagttgatataagaaca
atgatgattgacagggtacctggtgagcggaagattgaaacactggtcaagtctcaggat
gagagatacattgatcgaggagtgaggacttacacatgggtaccagtcaatggtacagac
tacagtttggccttggttttgcccgagtacaacatgcactacatccaagcaaagctaggg
gacataaagcaagccatgtcctcagataccatgcaaatggagaattttgacgattatggc
tacacctttatagcacccagggaatattgccaggacctgaaactctccaccaacaacact
cagttcctcatggatgtcaacgagtacatcggcagtagaactcccagtgacccactgtgt
aatgtgacactgctcaacaggctcttactggatgctaatcttacagctgaactggtcaat
ctctggaaaaagcagagtgtagaaggtgtgttagccaggtttgtggctacagatgggggc
atcacacgggtttaccctaaaagtgctggagaggagtggactgaggatgcactcaccttt
gagtccagtttctacaagaggagtttagacaataacatatacatcttcactgccccttat
gtcaacaaaagcagggagtccagttatgagtctggtattctggtcagtaaagctgtggaa
ctggacttcaatggaaacaaactcaaaccagctgtggtgggagtcaaactcaatgtatct
gcctggatgaacagcttcatgaacgccaccataaagatgaattgtaaggatgagatctgt
ggctgcctcaggaatgataagcaagtggactgtgcgatactagatgatggaggcttcctg
ctcatgtcaaatcaagatgaatacatcacacagataggtcagttctttggcgaagtggac
cccattctcatggctagtctgttgaataaatcactctactcgtttaataaaacctacgat
tatcagtcagtgtgtgacccagagaaagagccaaaggctgccgctgggccacgatctgcc
tatgtgcctaccatggcggatatgttaagtctgggctggtgggcctccactgctgcatgg
tcaatgcttcagcatttccttgtcagtctcacattcccaagttttctacacgcagaggag
gacaactcagatgcctactcaaaggagagctgtataacagagcagactcaatatttcttt
gcaaatgatgataggtctttctccagtacggtagactgtggaaactgttccagaatgtac
agagcagagaagctgcccagcactaacctggtgtttctgattactgatgccaagagcacc
tgtctcacctgtgacaccaatccagtgagacaggccgagcagccttccactggtccggat
ccctgtatactggcccagaagccccgctacagaaaaggcccaagcgtctgctttgatcgg
aacattacagaagatgcatctgattgtggcagtggttctagtctggttccctctctctgg
ccagtgctaactcttcaactgctgctcttctggctgctcactggaactggctgctgctcc
tga
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