Neoarius graeffei (lesser salmon catfish): 132889441
Help
Entry
132889441 CDS
T10798
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04060
Cytokine-cytokine receptor interaction
ngra04672
Intestinal immune network for IgA production
ngra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132889441 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132889441 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
132889441 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ngra04052
]
132889441 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
ngra00536
]
132889441 (cxcl12a)
Cytokines and neuropeptides [BR:
ngra04052
]
Cytokines
Chemokines
132889441 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Chemokines
132889441 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Uroplakin_II
Motif
Other DBs
NCBI-GeneID:
132889441
NCBI-ProteinID:
XP_060781919
LinkDB
All DBs
Position
7:complement(52618829..52632096)
Genome browser
AA seq
99 aa
AA seq
DB search
MDVRMILLAVLVIVNTYGSESEAKPISLVERCWCRSSLVMVPQRSIRELKFIHTPNCPFQ
VIAKLRSNQVVCLNPETKWIKQYLEKALERMKTKQESHN
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcagaatgatcttactggctgttctggtaatagtaaatacctacggatctgaa
tcagaagccaagcctatcagcctggttgagaggtgttggtgccgttctagcctcgtcatg
gtcccacagaggagcatccgtgagctgaagttcatccacacacccaactgtcctttccaa
gtcattgccaaactgaggagcaatcaagtggtgtgcctcaatcctgagacaaaatggata
aaacagtacctggagaaagcccttgaaagaatgaagaccaaacaagagtcgcacaactaa
DBGET
integrated database retrieval system
