Neoarius graeffei (lesser salmon catfish): 132890244
Help
Entry
132890244 CDS
T10798
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132890244 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132890244 (tdg.2)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
132890244 (tdg.2)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132890244 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-GeneID:
132890244
NCBI-ProteinID:
XP_060783017
LinkDB
All DBs
Position
8:complement(73566158..73589409)
Genome browser
AA seq
406 aa
AA seq
DB search
MEEKQFESHRQRMDSYQHWYHSTHQQFQPEPVPQYSQMVNVFHDQQDVREYTVMNELSVH
KDPAQISQFHQLPVQPPALPSTPDRGKKRGRPPKQEQNDQTDEVTVKKAKRTLDRFNGMS
VEEVMAKKLPDIITYNLDILIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTDEQLNY
MHDQSLPEKYGIGFTNMVERTTPGSKDLSNKEIREGGKQLLEKLQKYRPRIAVFNGKCIY
ETFCKEIFGVKAKNLEFGLQPYKVPDTDTVCYLMPSSSPRCAQFPRAQDKVHFYIKLKEL
RDQLKGMVQNQEIQEMQYTFDLIMAKEDAKRMAIKEEQHDPGYEESSSSATQQMCSFDPA
NEQGATHSEHSSSTGQVGSNQWTMQPFADQIPDIGYSSNNETSQYF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagcagtttgagtctcacaggcagcgcatggattcatatcagcactggtat
cattcaacacatcagcagtttcagccggagccagttcctcagtacagccaaatggttaac
gtgtttcatgaccagcaggatgtccgagagtataccgtcatgaatgaattatcagtccat
aaagatccagctcagatcagccagtttcatcagctgcctgtccagcctccagcacttcca
tcaacacctgatagagggaagaagcgtggacgacctcccaagcaggaacaaaatgaccaa
actgatgaagtcactgtgaaaaaagccaaacgaactctggacagatttaatggcatgtct
gtggaagaggtcatggccaaaaaactgcccgacatcatcacctacaatctggacatactg
ataattggtatcaaccctggattgttgtcagcatataagggacgacattacccaaatcca
ggaaaccatttctggaagtgcctgttcttatcagggctcacagatgagcaactgaattac
atgcatgatcagagtcttccagaaaaatacggcatcggatttactaacatggtggagagg
acgacacctgggagcaaagacctctcaaacaaagagattcgagaaggaggcaaacaactt
ctggaaaagctgcagaaatataggccacgaatcgcagtcttcaatgggaaatgtatttat
gaaacattctgtaaagagattttcggagtcaaagccaagaacctggaatttggactgcag
ccctacaaagttccagacactgatacagtttgttacctcatgccttcatccagtccacgc
tgtgctcagttccctcgagctcaggacaaagttcatttctatattaagctgaaggaactc
cgggaccagctgaagggtatggtgcagaatcaggagattcaagagatgcagtacacgttc
gacttaatcatggccaaagaggatgccaaaagaatggctattaaagaagagcagcatgac
cctggctatgaggaaagctcttctagtgcgacgcagcagatgtgcagcttcgatcctgct
aatgaacaaggtgctacacattcagaacattcttcatctacaggacaggttgggtcgaac
cagtggacaatgcagccgtttgcagaccagatcccagacattgggtactccagcaacaat
gagacatcgcagtatttctga
DBGET
integrated database retrieval system
