Neoarius graeffei (lesser salmon catfish): 132890511
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Entry
132890511 CDS
T10798
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
ngra04140
Autophagy - animal
ngra04217
Necroptosis
ngra04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132890511 (sqstm1)
04137 Mitophagy - animal
132890511 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
132890511 (sqstm1)
04218 Cellular senescence
132890511 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132890511 (sqstm1)
03029 Mitochondrial biogenesis [BR:
ngra03029
]
132890511 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132890511 (sqstm1)
Membrane trafficking [BR:
ngra04131
]
Autophagy
Mitophagy
Cargo receptors
132890511 (sqstm1)
Pexophagy
132890511 (sqstm1)
Aggrephagy
132890511 (sqstm1)
Xenophagy
132890511 (sqstm1)
ER-phagy
ER-phagy recepters
132890511 (sqstm1)
Other autophagy associated proteins
Midbophagy
132890511 (sqstm1)
Mitochondrial biogenesis [BR:
ngra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
132890511 (sqstm1)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132890511 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
132890511
NCBI-ProteinID:
XP_060783408
LinkDB
All DBs
Position
8:22476789..22481454
Genome browser
AA seq
442 aa
AA seq
DB search
MSVTVKAYLLGKEECHKEIRRFAVDQDVSTSFEYLSRKVIDVFANLRNVSFQMYYRDEDG
DMIAFSSDEELMMGLTMVKDDTFRIFIKEKREHKRDLPHMDQGCTFPPPPGPHHMYPPGF
PPMGLPPHHQLMVHPGVTCDGCEGQVAGTRFKCTVCPNYDLCSTCQAKGLHKEHALLPIF
HPMANMNEWFPRGKFWRKMRHCMWAGAQAQNQAQNQAQPGSSNCQPSSQQANSQEGQTGA
SSTQTNMEYLKNIGEGVAALLSPLGIDVDIDVEHEGKKAKVTPPPSASSGPPSGRSDGSS
GGLSKGADGSPSSVGSTNGGPKDQKDQSNDEEWTHLSSKEVDPSTGELQSLRMEVDGGND
NPAPLDHGSTINPGPSGLREAALYPHLPQDADPRLVESLSQMLSMGFTDEGGWLTRLLHT
KNYDIGAALDTIQYAKPPGQQK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgacggtgaaggcttatctcctcgggaaagaggagtgtcataaggagatccgc
cgcttcgccgtggatcaggatgtctcgacaagttttgagtacttgagtcggaaggtgata
gatgttttcgcaaacctacgcaatgtctccttccagatgtactacagagatgaggatgga
gacatgattgccttctcctcagatgaggaactcatgatgggactgactatggtgaaggat
gataccttccgcattttcatcaaggaaaaaagggagcacaagcgtgacctccctcatatg
gaccaaggatgcaccttcccccctcctccaggaccacaccacatgtatcctcctggattc
cctcccatgggtctacctcctcatcaccagctgatggttcaccctggggtgacttgtgat
ggttgtgagggacaagtggctgggacccgcttcaagtgcactgtgtgccccaattatgac
ctgtgctctacctgccaggccaagggcctccacaaggagcatgctctcctgcctattttt
caccctatggccaatatgaatgagtggtttccccgtggcaagttttggcgcaagatgagg
cattgcatgtgggctggggcccaggcgcaaaatcaggctcaaaaccaggcccagcctggg
tcatctaattgccagcccagctcccagcaggctaactcgcaggaaggtcaaactggagcc
tcatctacccagaccaatatggagtacttgaagaacattggagagggggtggctgccttg
ctgagcccccttggcattgatgtggacattgatgtcgagcatgagggcaaaaaggccaaa
gtgaccccacctccttctgcctcaagtggacctcctagtggccggagtgatggtagctct
ggaggcctttccaagggtgcagatggaagtccaagcagtgtagggagtactaatgggggg
ccaaaggatcagaaagaccaaagtaatgatgaggagtggacccatctgagctcaaaggag
gtggacccatccacaggtgagctccagtcactgaggatggaggtggatggaggaaatgat
aaccctgctccacttgaccatggttccaccattaacccaggccccagtggtctgcgtgaa
gctgccctctatccacatttgccacaagatgctgaccctcgactggtggaatctctgtcc
cagatgctctccatgggcttcacagatgaaggtggttggctgaccagactgctccacact
aagaactacgacattggagctgctctggacaccatccagtatgccaaacccccaggccaa
cagaagtga
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