KEGG   Neoarius graeffei (lesser salmon catfish): 132892378
Entry
132892378         CDS       T10798                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-S alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04145  Phagosome
ngra04514  Cell adhesion molecules
ngra04672  Intestinal immune network for IgA production
ngra05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    132892378
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    132892378
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    132892378
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132892378
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngra04147]
    132892378
Exosome [BR:ngra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132892378
  Exosomal proteins of epithelial cells
   132892378
  Exosomal proteins of breast milk
   132892378
SSDB
Motif
Pfam: C1-set Ig_3 C2-set_2 I-set ig Ig_2 Cna_B
Other DBs
NCBI-GeneID: 132892378
NCBI-ProteinID: XP_060786620
LinkDB
Position
10:complement(1541367..1557168)
AA seq 204 aa
MKLCVILVIAMILPVNAEYYTTMQQISRLPPFADPVDFPQLNEFTIIERYDCLQDMNYAI
AVIGSSPEYSEPPEVSIYPKHNVVPGVENNFICFMKNFYPPHIKVNWMRNGESVTEGVYN
SQLSMNTDGTFNSFSILTSSPTEGDEYSCTVEHEALDSPQTRTWDEPVLIQCVTPVVVFA
VGIAVGILGLAIGMFFVIKASCSC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaagctctgtgtgattcttgtcattgcaatgattctgccagtgaacgctgagtattac
accaccatgcagcaaatcagccgacttcctccgtttgcagacccagttgattttccacaa
ttgaatgagttcaccattattgaaagatatgactgtcttcaggacatgaattatgcgata
gcagtgattggcagttcacctgagtacagcgagcctccagaggtcagcatctacccaaaa
cacaatgtggtgcctggagtagaaaataacttcatctgctttatgaagaatttctatcct
ccacacatcaaagttaactggatgaggaacggtgagtcagtgacagagggagtgtacaac
agccagctttcaatgaacacagacggaaccttcaattcattctccatcctgacgagttct
ccgactgaaggagatgaatacagctgcacggtggagcatgaagctctggactcacctcag
accagaacatgggatgaaccagtgttaattcagtgtgtaactccagtggtggtgtttgca
gtgggaattgctgttggaatactgggattagctataggaatgttcttcgtcattaaagca
tcatgttcctgttaa

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