Neoarius graeffei (lesser salmon catfish): 132892525
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Entry
132892525 CDS
T10798
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00310
Lysine degradation
ngra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132892525 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132892525 (prdm6)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132892525 (prdm6)
Enzymes [BR:
ngra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
132892525 (prdm6)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
132892525 (prdm6)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
132892525 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
132892525
NCBI-ProteinID:
XP_060786785
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All DBs
Position
10:complement(52706854..52741275)
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AA seq
564 aa
AA seq
DB search
MLKPGDQSGSAFLKVDPTYLQHWQQLFPQSQLKNCAIPQIPAPDRAPVAAESLRQRTTLI
SSTTAASAALTPSSSSSCAPAVSALTGLSQLSAPQLALFGHTLCTEVPPAENSGASQSKE
LCLQSNFNDKASRLKLTSEELDYYLYGQQRMEIIPLNNHISDLNNRCDMCADNRNGECPM
HGPLHSLRRLVGTSSASTAVPLPEVPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGT
WIGPFQGIPLMLEKVQSGAVCNTRHLWEIYDQEGTLQHFIDGNDPSKSSWMRYIRCARHC
GEQNMTVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVI
EAMSRQESLQPFSKMSKSSSSAMLQRSMVFPHSPCSRSFSLLDKVGNIESGFNQLNTKNQ
RVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFA
QPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQ
LSRHQRMPNECKPISESSESIEVD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggggatcagagcggttctgctttcctcaaagtggatccgacttacctt
cagcactggcagcagcttttcccacagagtcagctgaagaactgcgcgattccgcaaatc
ccggcgcccgaccgagcgcctgtagcggcggaaagcctccgccagagaaccactttaatt
tcctccaccaccgccgcctcagctgctttaacaccgtcctcgagctcgtcgtgcgctcct
gccgtgtccgcgctcacgggcttatcgcagctctccgcgccacagctcgcgctattcgga
cacacgctgtgcaccgaggttccaccggccgaaaacagcggcgcgtctcagtccaaggaa
ctttgcctgcagtccaactttaacgacaaagcgtcccggttgaagctgacctcagaggaa
ctggactactatctatatggacagcagaggatggagattatcccactgaacaatcacatc
agtgatctcaataaccgctgtgacatgtgtgcagataaccggaacggtgagtgccctatg
catgggcccctgcactcactgcggcgcctggtagggacaagtagtgcatcaactgctgtg
ccacttcccgaggttcccgaatggctccgtgatctaccccgtgaagtctgcctctgcacc
agcacagttccaggcctgggctatggtatctgtgctgcccagcgcataccacagggcact
tggattgggccttttcagggtattcctcttatgctggagaaggtgcagtctggagcggtg
tgcaacacaagacacttatgggagatctatgaccaggagggcacgttacagcactttatt
gatggcaatgatccaagcaagtcaagctggatgaggtacatccgctgtgccagacactgt
ggggaacaaaacatgacagtggttcagtacagatcatgtattttctaccgggcttgtatg
gatattccacgaggaacagagcttctggtctggtacaatgatagttacacctccttcttc
ggcatccccctgcagtgtattgcacaggatgaaaacttgaatgtgccatctactgtaatc
gaggccatgtcccgacaggaaagcctgcagcctttcagcaaaatgtccaaatcctcttca
tctgccatgctgcagcgctccatggttttccctcactcgccctgctcacggagtttctct
ctcctggacaaggtgggcaatatagaatctggctttaaccagctgaacaccaagaaccag
cgggtcctggccagtcccacatccaccagtcagcttaacagtgagttcagcgactggcac
ctctggaagtgtggccagtgcttcaagaccttcacacaacgcattctcctgcaaatgcat
gtgtgcacacaaaacccagacagaccatatcagtgtggacactgttcacagtcctttgcc
cagccttcagagctacgcaaccacgttgtaacacattccagtgaccggcccttcaagtgt
ggctattgtggccgagcttttgccggagccacaacactgaacaaccacatccgcacccac
actggggagaagccattcaaatgtgagcggtgtgagaggagcttcacgcaagccacacag
cttagcagacatcagcggatgcccaacgagtgcaaacccatcagcgagagcagcgaatca
attgaggtggattag
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integrated database retrieval system
