Neoarius graeffei (lesser salmon catfish): 132892693
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Entry
132892693 CDS
T10798
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04145
Phagosome
ngra04514
Cell adhesion molecules
ngra04672
Intestinal immune network for IgA production
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132892693
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132892693
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
132892693
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132892693
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132892693
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132892693
Exosomal proteins of epithelial cells
132892693
Exosomal proteins of breast milk
132892693
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
C2-set_3
Cna_B
Ig_2
DUF5562
Motif
Other DBs
NCBI-GeneID:
132892693
NCBI-ProteinID:
XP_060786989
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All DBs
Position
10:6247356..6251307
Genome browser
AA seq
267 aa
AA seq
DB search
MSELLRILLLLLPAILHTANGHSETAEYRCLRSSDDLSDMEYILSYTFNKIKYMEFNSTV
GKFVGYTAHGIYNAERANNDAAYLQTWKAELDRYCKHNAQIYYSIILSKAVEPRVKVTLV
KKSDGTHPARLMCSAYNFYPRHIEVTWLRNGKEVKGSVTSTEEMADGDWYYQIHSHLEYM
PESGEEISCVVQHTSFQKPMVYKWDPSMSEPDKSKIAIGASGLVLGIVLSAAGFIYYRKK
CSGQWKIAGTLQTETTDPGADINTGII
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagctgctgagaatactgctcctcttactgcctgccatcctgcacacagcaaat
gggcattccgagacagccgaatataggtgcctccggagctctgatgatctcagtgacatg
gagtacatactgtcttacaccttcaataagatcaaatacatggagtttaacagcactgtg
gggaagtttgtgggatacactgcacacggcatctataacgcagagagagcgaacaatgac
gctgcatacctgcaaacatggaaagccgaactggatcgttactgtaagcacaatgctcag
atttactacagcatcatcctcagtaaagcagttgagccccgggttaaggtcactttggta
aagaagtcagatggcactcacccagccaggctgatgtgcagcgcttacaacttttacccc
cgacacattgaggtgacctggctgagaaatgggaaagaagttaagggaagtgtaacgtcc
actgaggagatggctgatggagactggtactatcagatccactcacatctggagtacatg
cctgaatctggagaggagatctcctgtgtggtgcaacacaccagcttccaaaagcccatg
gtctataagtgggatccctcgatgtctgaacctgataagagtaagattgctatcggggct
tcagggctggtgttggggatcgtgctttcagctgctggattcatctactacaggaagaaa
tgctcaggtcagtggaagattgcaggaactctacaaacagaaacgacggatcctggtgct
gacataaacacaggcatcatttga
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