Neoarius graeffei (lesser salmon catfish): 132892724
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Entry
132892724 CDS
T10798
Name
(RefSeq) H-2 class II histocompatibility antigen, A-F beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04145
Phagosome
ngra04514
Cell adhesion molecules
ngra04672
Intestinal immune network for IgA production
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132892724
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132892724
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
132892724
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132892724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132892724
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132892724
Exosomal proteins of epithelial cells
132892724
Exosomal proteins of breast milk
132892724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
132892724
NCBI-ProteinID:
XP_060787045
LinkDB
All DBs
Position
10:complement(1521995..1528086)
Genome browser
AA seq
267 aa
AA seq
DB search
MRLCAVSFLCIMQVLFTLKAVNGYYGHQYFLCYFSQNVSTVEFIYSWYFNKLEYVRYNST
SDKYMGFTDSMVSEVEQLNQDPSNSLSFLVGEICLEYRNKFYNSILKTVKPEVLVRLLRP
EVDLEPAVLVCSAYDYYPKGIKVSWLRNGEVISDGVSSTDELSNGDWYYQMHSYLEYRLR
PGENISCIVEHESLTQPLIHTWEASLPEAERNKLIIGIFFLAFGIVLAIAGFLYYMLSCR
ECPAEPTSQSISLERTVSETSSEASNL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtgtgctgtttcctttctctgcataatgcaggttttattcacattgaaagca
gtgaatggttactatggacatcagtacttcctgtgctacttctctcagaatgtaagcacc
gttgaattcatttactcttggtacttcaacaagttagaatatgtgaggtacaacagcact
tcagataaatacatgggattcacagacagcatggtgtcagaggtggagcagttgaatcaa
gaccccagtaacagcctctctttcttggttggagaaatctgcttagaatacagaaataaa
ttctataacagcatcctgaagacagtgaaacctgaggtccttgtgaggttactgaggccc
gaggttgaccttgaaccagccgtgctggtgtgcagtgcgtatgattattaccccaaagga
atcaaagtgtcatggctgagaaatggcgaggtcatcagtgatggcgtttcctccaccgat
gagctttcaaatggagactggtactatcagatgcacagttatctcgagtacagattgaga
cctggagaaaacatctcctgcattgtggagcacgagagtttaacacaacctctcatacac
acctgggaggcttcacttcctgaggctgagaggaataagctgattatcggcatttttttc
ctggcgtttggaatcgttttggccatcgctggatttctttattacatgctgagctgtaga
gaatgtcctgcagaaccaacgtcacagtcgatatctttagagcgcactgtttcagagacg
agttcagaagcttcaaacttataa
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