Neoarius graeffei (lesser salmon catfish): 132892726
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Entry
132892726 CDS
T10798
Name
(RefSeq) H-2 class II histocompatibility antigen, A-F beta chain-like
KO
K06752
MHC class II antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04145
Phagosome
ngra04514
Cell adhesion molecules
ngra04672
Intestinal immune network for IgA production
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132892726
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132892726
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
132892726
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132892726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132892726
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132892726
Exosomal proteins of epithelial cells
132892726
Exosomal proteins of breast milk
132892726
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
Ig_3
C2-set_2
Ig_2
Motif
Other DBs
NCBI-GeneID:
132892726
NCBI-ProteinID:
XP_060787049
LinkDB
All DBs
Position
10:complement(1578549..1584580)
Genome browser
AA seq
267 aa
AA seq
DB search
MQLCAVSFLCIMQVLFTLKAVNGYYGHQYFLCYFSQNVSTVEFISSWYFNNLEYLRYNST
SDKYMGFTDSIVSVVEQLNQDPSNSLSFLVGELCLKYRNKYYNDILKTVKPEVLVRLLRP
EVDLEPAVLVCSAYDYHPKGIKVSWLRNGEVISDGVSSTGELSNGDWYYQMHSYLEYRLR
PGENISCIVEHKSLTQPLIHTWEASLPEAERNKLIIGIFFLAFGIVLAIAGFLYYMLSCR
ECPAEPTSQSISLERTVSETSSEASNL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtgtgctgtttcctttctctgcataatgcaggttttattcacattgaaagca
gtgaatggttactatggacatcagtacttcctgtgctacttctctcagaatgtaagcacc
gttgaattcatttcctcttggtacttcaacaacttagaatatctgaggtacaacagcact
tcagataaatacatgggattcacagacagcatagtgtcggtggtggagcagttgaatcaa
gaccccagtaacagcctctctttcttggttggagaactctgcttaaaatacagaaataaa
tattataacgacatcctgaagacagtgaaacctgaggtccttgtgaggttactgaggccc
gaggttgaccttgaaccagccgtgctggtgtgcagtgcgtatgattatcaccccaaagga
atcaaagtgtcatggctgagaaatggcgaggtcatcagtgatggcgtttcctccaccggt
gagctttcaaatggagactggtactatcagatgcacagttatctcgagtacagattgaga
cctggagaaaacatctcctgcattgtggagcacaagagtttaacacaacctctcatacac
acctgggaggcttcacttcctgaggctgagaggaataagctgattatcggcatttttttc
ctggcgtttggaatcgttttggccatcgctggatttctttattacatgctgagctgtaga
gaatgtcctgcagaaccaacatcacagtcgatatctttagagcgcactgtttcagagacg
agttcagaagcttcaaacctataa
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