KEGG   Neoarius graeffei (lesser salmon catfish): 132892754
Entry
132892754         CDS       T10798                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 4 chain-like
  KO
K06752  MHC class II antigen
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04145  Phagosome
ngra04514  Cell adhesion molecules
ngra04672  Intestinal immune network for IgA production
ngra05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    132892754
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    132892754
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    132892754
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132892754
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngra04147]
    132892754
Exosome [BR:ngra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132892754
  Exosomal proteins of epithelial cells
   132892754
  Exosomal proteins of breast milk
   132892754
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 ig Ig_2 Cna_B DUF5562
Other DBs
NCBI-GeneID: 132892754
NCBI-ProteinID: XP_060787100
LinkDB
Position
10:4308808..4311435
AA seq 249 aa
MSELLRILLLLLPAILHTANGNSLAMETWCLRSSDGLSDMEFILSYIFNKINYMEFNSTL
GKYVGYTEIGIKNAERLNKDTALLESRKAEVERYCKPNAQIYSSAVLSKAVEPQVEVTLV
KKSDGTHPARLMCSAYSFYPPNIEVTWLRNGQKIKGGVTSTEEMADGDWYYQIHSHLEYM
PESGEEISCVVQHASFQKPMVYKWDPSMSEPDKSKIAIGASGLVLGIVLSAAGFIYYRKK
CSGRILVPT
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtcggagctgctgagaatactgctcctcttactgcctgccatcctgcacacagcaaat
ggaaattcactggcaatggaaacttggtgcctccggagctctgatggtctcagtgacatg
gagttcatactgtcttacatcttcaataagatcaactacatggagtttaacagcactctg
gggaagtatgtgggatacactgaaataggcatcaaaaacgcagagagattgaacaaagac
actgcactgctggaatcgcggaaagccgaagtggaacgttactgtaagcccaatgctcag
atttactccagcgccgtcctcagtaaagcggttgagccccaggttgaggtcactttggta
aagaagtcagatggcactcacccagccaggctgatgtgcagcgcttacagcttttaccca
ccaaacattgaggtgacctggctgagaaacggtcaaaaaataaagggaggtgtaacgtcc
actgaggagatggctgatggagactggtactatcagatccactcacatctggagtacatg
cctgaatctggagaggagatctcctgtgtggtgcaacacgccagcttccaaaagcccatg
gtctataagtgggatccctcgatgtctgaacctgataagagtaagattgctatcggggct
tcagggctggtgttggggatcgtgctttcagctgctggattcatctactacaggaagaaa
tgctcaggacggatcctggtgccgacataa

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