Neoarius graeffei (lesser salmon catfish): 132893959
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Entry
132893959 CDS
T10798
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132893959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132893959
NCBI-ProteinID:
XP_060789121
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Position
11:complement(64685462..64708867)
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AA seq
1789 aa
AA seq
DB search
MKRGKSRGSKEDGKGKYEPAILETEVLDRRFGKGQDPDTISLASVTAVTTNVSNKRSKPD
IKIEPSAGRLMDFQVSITVIEARQLVGLNMDPVVCIEIGDEKKYTSMKESTNCPYYNEYF
VFDFHVSPDVMFDRILRVSVIHSKNLLRSGTMVGTFKMDVGTVYSQPDHQFYHKWAVLCD
PDDITAGCKGYVKCDIAVVTKGENIKTPHKATETDEDDIEGNLMLPEGVPADRQWARFYV
KIYRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQVQFAGQKGKTSIQKSCYEPIWNEQ
IVFTEQFPPLCKRLKVQIRDADKVNDVALGTHFIDLRKISNDGDKGFLPTLGPTWANMYG
SIRSYTLMDEYQDLNEGLGEGVSFRARLLISLAVEILDTSSPDTVYSSEVQVEGVPNISE
NATGKIEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGSDIDIPTKPRTKKSKKGEGD
EESELIQGSSDEELDDGGELESVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQR
RRLYNANIIDHIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSNGCSDFLTLANKDQ
SQTGITKLDRERLKLCMWELENMGQQAKAMRSQVKKKTVKDKVKLTQNFLQKLRFLSDEP
QHSVPDVYIWMISSGKRIAYARVPSKDILFSNVEEEIGKDCAKVKTVFFKLPGKKSFGPA
GWTVQAKTEIYLWLGLNKQRKDFLNGLPNGFEENKAVKGPGIHSSPPISLIYTMKQIFQL
RVHMYQARSLFAADSTGLSDPFTRVFFSTHSQVTEIVNETLCPTWDQLLVFDNVELYGEA
GELRDDPPIIVLEIYDQDSMGKADFMGRTFAKPITKMTDEHYGPPRFPPQLEYYQVYRGN
CSAGEMLAAFELLQIGPGGKADLPPIDGPTDMDRGPILPVPIGIRPVLSKYRIEILFWGL
RDLKRVNLTQVDRPRVDIECAGRGIQSALIPNYNKNPNFSTLVKWFEVDLPENELLHPPL
NIRVVDCRAFGRYTLVGSIAVTSLRKFIYRPPDKSVNNWSAMEEIVIHTEPEHAVKKMET
MVKLDSASDAVVKVDMPDDDKEGKGKKKKKKGEEVEEEPLDESMLDWWSKYFASIETLTE
ILKAQEAEKAEAEDREDMDADGADIKPDSNAKGNKKKKGKAKDKNKAVPGEVDKKKSKIE
EMKVYNRELESEFDHFEDWLHTFNLYRGKSGDDDENLLDEDRLVGKFKGSLCMYKVSDEL
YREMGIDSNMGTFQNLPHNDPINVLVRVYVIRATDLHPADINGKADPYIAIKLGKSEVKD
KENYISKQLNPIFGKSFDIDATFPMDSTLTVSIYDWDLVGTDDLIGETKIDLETRYYSKH
RATCGISSSYAIYGYNVWRDPMKPTQILAKLCKDNKLDPPQYGPGGRVKVANRVYTGPTE
IEDENGLKKQTDEHLALAVLNHWEDIPRVGCKLIPEHVETRPLLNSNKPGIEQGRIEMWV
DMFPKDMPAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKG
QQEDKQDTDVHYHSLTGEGNFNWRFIYPFDYLMAEEKIVISKKESMFSWDETEYKIPARL
NLQVWDADHFSADDFLGAIELELNRFPRGAKTPKLCTLDMVLNEKDMPMVNIFKQKRIKG
WWPLIARDENDEMEITGKVEAELHLLTGEEAEKSPVGEGRNDPEPLEKPNRPDTTFLWFI
SPLKAIRYLICNNYKWLIIKIVVALLVLAMLGLFLYSMPGYMVKKLLGA
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtggaaagtcccgtggctctaaggaggatgggaaaggtaagtatgaaccagcc
atcctggagacagaggtcttggacagaaggtttggcaaaggacaagaccctgacaccatt
tcactggcctctgtcactgctgtaacaacaaatgtttccaacaaaagatcgaagcctgac
atcaaaattgaacctagtgctggaagactgatggattttcaagtcagtattacagtcatt
gaggctcgacaattagtgggcttgaacatggatccagtggtctgtattgaaattggtgat
gaaaagaagtacacttcaatgaaggagtcaaccaactgcccttactacaatgagtacttt
gtcttcgacttccacgtttctcctgatgtcatgtttgacaggatcctgagggtgtcagta
atccattctaaaaatcttctgcgaagtggaacaatggttggtaccttcaagatggatgtg
ggaacagtttattcacagcctgaccaccagttctaccacaaatgggctgttttatgtgat
cctgatgacatcactgcagggtgtaaaggctatgtcaaatgtgatattgctgtggttaca
aaaggtgaaaacatcaaaactccacacaaggccactgaaactgatgaggatgacattgag
gggaatcttatgttgccagaaggtgttccagctgaccgtcagtgggctcgattctatgta
aaaatctacagagctgaaggtttaccaaagatgaacaccagcattatggctaatgtgaaa
aaagccttcattggtgagaataaagacctggtggacccatatgttcaggtgcaatttgct
ggtcaaaagggaaaaacctctatccagaaaagctgctatgaaccaatctggaatgagcag
attgttttcactgaacaatttccaccactgtgtaaacgcctgaaggttcaaatccgtgat
gcggacaaagtgaatgatgtggctcttggaacacatttcattgacctacgaaagatctca
aatgatggcgataaaggctttctccccactctggggccaacctgggcgaacatgtatggt
tcaatacggagctacaccctcatggacgagtatcaggatctgaatgagggcctgggagag
ggagtttcatttcgggcccgtctgctgatcagcctggctgtggagattttggacacatcc
tctccagacacagtgtactcttctgaggtccaagtagaaggagtgcccaatatttcagag
aatgctactggaaaaatcgaggaatttttcttgtttggagcatttctagaagcaacaatg
attgacagaaagattggtgacaaacccattaactttgaagttacaataggaaattatggc
agtgacattgatatccctaccaaaccaagaacaaagaaatcaaagaaaggagaaggtgat
gaagagtctgaactcatccaaggctccagtgatgaagagttggatgatggtggagaactg
gaatcagtatctaccactccaccaatgaaaccagtcatcactgacaggaactactttcac
cttccatattttgaaagaaagccgtgtatttatattaagagctggtggcaagatcagaga
agaagactatacaatgccaatataatagaccacattgcagataagttggaagaaggactg
aacgatgttcaggagattattaagacggagaaagcttttcctgagcgtcggctcagagga
gttctagaagaactgagcaatggctgcagcgactttctaacactggcaaacaaggaccaa
agccagacagggatcacaaagttggatcgagaaaggctgaaattatgcatgtgggaactg
gaaaatatgggccaacaagcaaaggcaatgcgatctcaagtgaaaaagaaaactgtcaag
gataaagtcaaattgacacaaaacttcctccagaaactgagattcttgtctgatgagcct
cagcacagtgttccagatgtttacatatggatgatcagcagtggaaaacgcattgcatat
gctagagtgccctccaaagacatccttttctctaatgtggaggaggagattgggaaagac
tgtgcaaaagtcaagaccgttttcttcaagctcccaggtaaaaagagctttggaccagca
ggctggactgtccaagccaagactgaaatttacctctggctgggtttgaacaagcagcgc
aaagacttcttgaatggactaccaaatggatttgaggagaacaaggctgtcaaaggcccg
ggaatacactcatcaccaccaatcagcttgatctacaccatgaagcaaatcttccagctg
agagtacacatgtaccaggcaaggagcctgtttgctgcagatagcacaggcctttctgac
ccctttaccagagtctttttttcaactcacagccaggtcacagagattgtgaacgagacc
ctctgccccacatgggatcagcttctagtatttgacaatgttgaattatatggtgaggct
ggtgagctgagagatgatcctccaattattgtcctcgaaatctatgaccaagacagtatg
ggcaaagctgattttatgggaaggacatttgcaaagccaattactaagatgactgatgag
cattatgggccaccacgattccctcctcagctagagtactaccaggtgtaccgtggaaac
tgctccgctggtgaaatgcttgcagcttttgaactactgcagattggaccaggtggaaag
gctgatctcccccccatagacggacccacagatatggaccgtggtccaattctgcctgtt
cccattggcattaggccagtcctgagcaaataccgcattgagattttattctggggcctg
agggacctcaagcgagtaaaccttacccaggttgacagaccacgcgtggacatagaatgt
gctggaagggggatacagtcagctctcattcctaactacaacaaaaatcccaattttagc
acgctggtcaaatggtttgaagtggacctgccagagaatgagcttcttcatcctcctctg
aatattcgagttgtggactgcagagcttttggccgttatacactggttggctctattgca
gtcacctcattgcgcaaattcatctacagaccaccagacaagagtgtcaacaattggtct
gctatggaggaaattgtgatccacactgaacctgaacatgctgtgaagaagatggagaca
atggtcaaacttgactcagcatctgatgcagttgttaaggttgatatgcctgatgatgac
aaggaaggaaagggaaagaagaagaagaagaaaggggaagaggttgaggaagaaccacta
gatgagagcatgttggattggtggtccaaatactttgcatcaattgaaacactcacggag
atcctaaaagcgcaagaggctgaaaaggcagaggcagaggacagagaggacatggatgca
gacggggcagatatcaaacctgactctaatgcgaaaggaaacaagaagaaaaaaggaaaa
gccaaggataagaacaaagcagtaccaggggaggttgacaagaaaaagtctaaaattgag
gaaatgaaggtgtacaacagagagctagagagtgaatttgatcactttgaagactggctc
cacacttttaatctttatcgaggaaagagtggtgatgatgatgaaaatttattagatgag
gacagacttgttggcaaattcaaaggctccttgtgtatgtacaaagtgtcagatgagctg
tatagagaaatgggaatcgattccaacatgggaactttccagaaccttccacacaatgac
ccaatcaatgtcttagttcgagtctatgtcataagggctactgatctgcaccctgcagat
ataaacgggaaagcagatccgtacattgcaattaagctgggaaagtcagaagtcaaagac
aaagaaaactacatctctaaacaacttaatcctatctttggaaaatcatttgacattgat
gcgacattccctatggactccactctcaccgtgtccatctatgactgggatttggtgggc
actgatgacttgattggggagacaaaaattgatttggagactcgctattacagcaagcac
agggctacatgtggtatctcttcaagctatgcaatctatggctacaatgtttggcgagac
ccaatgaagccaacacaaatactagcaaagctttgcaaggataacaaattagatccaccc
cagtatggccctggaggaagagtgaaggttgcaaatagagtttatacagggccaactgaa
attgaggatgaaaacggactcaaaaaacagacagatgagcatcttgctttagcggttctt
aatcactgggaggatattccacgagtgggctgcaaacttatccctgaacatgtagaaaca
agacctctactgaactctaataaacctggaattgagcaggggagaattgaaatgtgggtg
gacatgttcccaaaagatatgcctgcacctggacctgcacttgatatttcaccacgcaaa
ccaaagaagtttgaactcagagtaatcgtttggaatacagatgaagttgtcctagaagat
gacgatatattcacaggagaaaagtccagtgatatttttgtgagaggatggcttaaaggt
cagcaagaagacaagcaagacacagatgtccattaccactccctaacaggggaaggaaac
ttcaattggcgcttcatttacccttttgactatttaatggctgaagagaaaattgtcatt
tcaaagaaggaatccatgttttcctgggatgaaaccgagtacaagattcctgcccgtctg
aatctgcaagtttgggatgcagatcatttctctgcagacgacttccttggtgcaattgaa
ctagagctgaacagatttcctcgtggtgcaaaaactccaaaactgtgtacccttgacatg
gttcttaatgaaaaagacatgccaatggtcaacatcttcaagcagaaaagaatcaagggt
tggtggccgttgatagccagggatgaaaatgatgagatggaaatcacggggaaagtagag
gcagagctccaccttctgacaggtgaagaagctgaaaaaagccctgttggtgaaggacgg
aatgacccagaacctctagagaaacccaatcgccctgacacaacgttcctgtggttcatc
agtccactcaaagcaatccgatatctcatctgcaacaactacaaatggctgatcatcaaa
atcgtggtggctttgctggtgttagcaatgctgggcttattcctttacagcatgcctggg
tatatggtgaaaaagctacttggtgcctaa
DBGET
integrated database retrieval system
