KEGG   Neoarius graeffei (lesser salmon catfish): 132894167
Entry
132894167         CDS       T10798                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132894167 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngra03041]
    132894167 (smndc1)
Spliceosome [BR:ngra03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132894167 (smndc1)
 Complex B
    132894167 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    132894167 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 LMBR1
Other DBs
NCBI-GeneID: 132894167
NCBI-ProteinID: XP_060789589
LinkDB
Position
11:complement(21088405..21135947)
AA seq 237 aa
MSDELVKQLSSYRAQLQQVEAALSTDPENEDLLKLQKDLQEVIELTKDLLTSQPAEGAAN
TNSSDAVPPKHSWKVGDRCMAVWSQDGQQYEAEIEEIDGENGTAAITFTGYGNAEVVPLH
ALKAAEQAKSSKEEGSKPKSKKELQAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggatgagttggtgaagcaactgagcagctacagagctcagctccagcaggtggaa
gcagcgctctctacagacccagaaaatgaagatctgctgaagttacagaaagacctgcag
gaggtgatagagttgacaaaagatttgttgacgtctcagccagcagagggtgcagctaat
accaatagttcagatgctgtgccaccaaaacacagctggaaagtaggagatcgttgcatg
gctgtgtggagccaggatggacagcagtatgaggcagagatagaggagattgatggtgag
aatggcacagctgctatcaccttcactggctatggcaatgctgaggtagtgcctctgcac
gcactcaaagcagctgagcaggccaagagcagcaaggaggaaggaagcaagcccaagtcc
aagaaggagctgcaagcagagcaacgggaatacaagaagaaaaaggcacaaaagaaagtg
cagaggatgaaggagctagaacaagagagagaggaccagaaatccaaatggcagcagttc
aacaataaagcttattcaaagaacaagaaggggcaagtaaagcgcagtatattcgcttct
ccggagagcgtgaatggaaaagttggcgtgggtacatgtgggattgcagacaaacctatg
actcaatataatgacacatccaaatacaatgtgaggcatctgatgccacagtga

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