Neoarius graeffei (lesser salmon catfish): 132894304
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Entry
132894304 CDS
T10798
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04115
p53 signaling pathway
ngra04145
Phagosome
ngra04148
Efferocytosis
ngra04350
TGF-beta signaling pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Phagocytosis
Opsonins
132894304
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132894304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132894304
NCBI-ProteinID:
XP_060789941
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Position
11:43393668..43403668
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AA seq
1171 aa
AA seq
DB search
MMLTTLCLLLMLWSSQGSGIAESREDNSAYDLFELIKVHKKHHGVSLVKGPDPYSPAYKI
LNPNLIPLMPESFFRDLIYSIQEEKGFLFVANIKQAKKTRGSIFSIERRDGSGSVFELVS
NGIANTLDLIYATASGHHEVSIEDAQLATGSWMNITLFVQEDRAQLYIGCEEINTRELDV
PIHQILTPDVAEVSFLRIGKGAVKNRFMGVLQNARFVFRTTLETILRNIGCERSSFIIDV
VTLDNPVNGSSPALRTDYTGRKTKDLQDICGFSCEDLAGMFKELKGLGVVVKQLSNQLHQ
VTAENALIKTRIKNSSGVCLHNGVVYKDKDEWTVDSCTHCTCQNSATICRETSCPVMPCA
NAIVPDGECCPYCGPSNTTDDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCTGTSVQ
TRDCYLQECDKRFKQDGGWSYWSPWSSCSVTCGTGVITRIRLCNSPTPQMGGKDCQGEGR
QTEPCKMSHCPINGGWGPWSLWDSCSVTCNGGHQNRHRLCNNPVPKYGGKECIGDSKDTR
RCNSQDCPIDGCLSNPCFAGAKCTSFPDGSWKCGGCPVGFTGDGIHCEDIDECKMVPDTC
FTLNGVHRCENTSPGYNCLPCPPRYSGNQPFGRSSEQAMANKQVCEPRNPCEDGSHNCNK
KANCIYLGVYSDVMFRCECKPGYAGNGYICGEDTDLDGWPNANLHCVENATYHCKKDNCP
DLPNSGQEDYDKDGTGDACDHDDDNDGIPDERDNCQFVFNPRQFDQDQDEVGDRCDNCPY
NSNTDQIDTDKNGEGDACAIDIDGDGILNENDNCPYVYNVDQRDTDQDGVGDHCDNCPLE
HNPDQIDSDSDNVGDKCDSNQDIDDDGHQNNLDNCPYISNANQVDHDKDGKGDACDHDDD
NDGVPDERDNCRLVFNPDQLDSDGNGRGDACKHDFDQDNIPDILDVCPENFAISETDFTR
FQMVPLDPKGTSQIDPNWVVRHKGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDRD
DDYAGFVFGYQSSSRFYVVMWKQITQTYWSQTPTKAQGYSGLSIKVVNSTTGPGEHLRNA
LWHTGDTVGQVRTLWHDPKKIGWKDFTAYRWHLIHRPSSGLIRVVMYEGKKIMADSGNIY
DETYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaccacgttgtgtttactgctgatgctgtggagttcacaaggcagtggaata
gcagagagccgagaagacaacagtgcatatgatttatttgaactcataaaggtacataaa
aaacaccatggggtgagcctagtaaagggacctgacccttacagccctgcctacaaaatc
ctcaaccccaacctgatccctctcatgcctgagagcttcttcagggatctcatttactcc
atccaagaggaaaaaggcttcctattcgtggccaacatcaagcaagctaagaagaccagg
ggcagcatattctccatagagaggagagatggctctggttctgtttttgagcttgtctca
aatgggattgccaatactttagatctgatttatgccacagcaagcgggcaccatgaggtc
tcaattgaagatgcacagctggccaccggcagctggatgaacatcaccctgttcgtgcag
gaggaccgtgcacagctctatatcggttgtgaagagataaacacaagagaactagatgtg
ccgatccaccagattctgacaccagatgtggctgaagtctctttccttaggattggaaaa
ggagcagtgaaaaacagatttatgggagtgctccagaatgcacgctttgtatttagaacc
actttggagacaatccttcgcaacataggatgtgagcgctcctccttcatcattgacgtc
gtgacccttgacaacccagtgaatggctccagtccagctttacgcacagattacactgga
cgcaagaccaaagatctccaggacatctgtggcttctcttgtgaagacttggccggcatg
tttaaggagctcaagggacttggtgtggttgttaagcaactgtcaaaccagctccaccaa
gtgactgcagaaaatgctctaataaagaccagaattaagaactccagtggggtgtgcctt
cataatggcgttgtctacaaagacaaggatgagtggacagtggacagctgcacccactgc
acctgtcagaactctgccactatttgccgggaaacctcctgccctgtcatgccttgtgct
aatgccattgtgcctgatggtgaatgctgcccatattgtggaccttcgaataccactgat
gatggctggtctccctggtccgagtggacgcactgctcagtgacctgtggccgtggcatc
cagcagcgtgggcgctcatgtgatcgcatcaacagcaactgtacgggtacctcagtgcag
accagagactgctacctgcaggaatgtgacaaacgcttcaagcaagatggaggctggagc
tactggtctccctggtcctcatgttcagtgacctgtggcacgggtgtcatcactcgcatc
cgcctctgtaactcacccaccccacaaatgggaggcaaagactgtcaaggagaaggcaga
cagacagaaccatgcaagatgtcccattgcccaatcaatggaggctgggggccatggtca
ctttgggactcttgctctgtcacttgtaatggtggacatcagaacagacatcgcctttgt
aacaatcctgttcccaaatatggtggaaaagagtgcataggtgattccaaagatacccgc
aggtgcaactctcaagactgtcccattgatggctgtctgtccaacccttgctttgctggt
gcaaagtgcaccagctttcctgatggctcctggaagtgtggggggtgtccagttgggttt
actggagatggaatccattgtgaagacattgatgaatgcaaaatggttcctgacacttgc
ttcacactcaatggagtccatcgttgtgagaacacaagtccgggctataactgcctacca
tgtcctcctcgctactctggaaatcagccgttcggcaggagcagtgagcaagcaatggcc
aacaaacaggtctgtgagccaaggaacccatgtgaagatggcagtcataactgtaacaaa
aaggccaattgtatttatttgggcgtttactctgacgtcatgtttcgctgcgaatgcaag
ccaggctatgctggtaatggttatatatgtggagaggacactgacctggatggctggccc
aatgctaatctacactgtgttgagaatgccacctaccactgcaagaaggacaactgccct
gaccttcccaactctgggcaagaggactatgacaaagatggaactggggatgcttgtgat
catgatgatgacaatgatgggatccctgatgagagggacaactgccaatttgtcttcaat
ccaagacaatttgaccaagaccaagatgaagttggtgaccgctgtgataactgcccatat
aacagcaatacagaccagattgacacggacaaaaatggagaaggcgatgcttgtgcaatt
gatatcgatggtgatggtattctgaatgaaaacgacaactgcccatacgtgtacaatgtt
gaccagagagacactgaccaagatggagttggagaccactgtgacaactgtcctttggag
cacaaccctgatcagattgactctgattcagataatgtgggtgacaaatgtgacagcaat
caggacattgacgacgatggtcaccagaataatctggacaactgcccatacatctccaat
gccaaccaggttgatcatgacaaggatggcaagggtgatgcatgtgaccacgatgatgac
aatgatggtgtgcctgatgagagagacaactgtagactggtctttaatccagatcagtta
gactctgatggtaatggacgtggtgatgcttgcaagcatgactttgaccaagacaatatc
cctgatattctggatgtttgtccagagaactttgccatcagtgaaacagatttcactagg
ttccagatggttcctctagaccctaaaggaacttcacaaattgaccctaactgggtggtc
cgccataagggtaaagagcttcttcagacagtcaactgtgaccctggcattgctgttgga
tatgacgagtttaatgcagtggactttagtggaaccttcttcatcaataccgacagagat
gatgattatgctggctttgtattcggctatcagtccagctcccgcttctatgtggtgatg
tggaaacagatcacacagacctactggtctcaaacacccacaaaagctcagggctactct
ggattgtccatcaaagtggtcaattccaccacaggtccaggagaacaccttaggaatgct
ttgtggcatacaggagatacagtaggacaggtgcgcactttgtggcatgaccccaagaaa
attggctggaaggatttcactgcctacagatggcacctgatccatagacccagtagtgga
cttatcagagtcgtcatgtatgaaggcaagaaaattatggcagattctggaaatatatat
gatgagacatatgctggtggaagacttggcctctttgtcttctctcaggagatggtttac
ttctcagacctcaaatatgaatgtagagatgtctaa
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