Neoarius graeffei (lesser salmon catfish): 132895458
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Entry
132895458 CDS
T10798
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132895458 (trpc6a)
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132895458 (trpc6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
132895458
NCBI-ProteinID:
XP_060792091
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Position
12:complement(57910758..57933574)
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AA seq
869 aa
AA seq
DB search
MNQRRPVLEEKNKSELHANGKRNRSKDSLLVNSEFGDDCYGYYGHHYSDCTHQTRQIVAK
SRKQASRGAAYMFNAHPNSLTPVEERFLDAAEYGNIPVVRRMLEEIPGLDVNCVDYMGQN
ALQIAVANEHLEVTELLLKKDNLSRIGDALLLAISKGYIRIVEALLSHKAFADSRRLTAS
PREAAMHDDFFAYDEDGTRFSHDITPIILASHCHEYEVVHILLTRGARIEQPHDYFCTCD
TCNYHQKYDSFSHSCSRINAYRGLASPAYLSLSNEDPVLAALELSNELACLANIEKEFKN
DYRKLSMQCKSFVVGLLDLCRNTEEVEAILNGEVDESSELPGRPSLKRLNLAIKYELKKF
VAHPNCQQQLLSIWYENLSELRQQTTAIKFLVVLGVAIGLPFLSIIYLVAPCSKLGKIMR
GPFLKFVAHGASFTIFLGLLVFNAADRFDGSKLLPNMTVHDYPAQLFRMKTTPFTWMEML
IIFWIIGMIWAECKEIWCQGPREYLLEPWNMLDFGMLAIFIASFVTRILAYWHASKAQSY
VDEHYTDITNVTLPPEVEYFRLARLFWLPSDPQLISEGLYAIAVVLSFSRIAYILPANES
FGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYLGAKQNDAFTTIEESFKTLF
WAIFGLSEVKSVVVNNKHKFIENTGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDAD
VEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSVYGLALGLKSLLVKLFDKHRAIMKNEA
ELSELGENKTNKMRSHRYQMIMKRLIKRYIIKAQMDKESDEVNEGELKEIKQDISSLRYE
LLEEKSHNMDRMAELISKLEQCVCLHNVK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaggagacctgttttggaagaaaaaaataaatcagaattacatgccaatgga
aagaggaacagaagtaaagacagtctactggtgaattctgaattcggtgatgactgttat
ggctattatggacatcactatagtgattgcacacatcagactcggcagattgtggccaag
agcagaaagcaggcctcacgaggggcagcctatatgttcaatgcgcatcccaacagcctg
acacctgtggaggagcggttccttgatgctgctgagtatggaaacatccctgtagtgcgg
cgaatgcttgaggagattcctgggctggatgtgaactgtgtggattatatgggccagaat
gccttacagatagcagtagcgaacgaacatcttgaggttacggaacttctgttaaagaag
gacaacttgtctcggattggcgatgcactccttttagctataagcaaaggctacatacgg
attgttgaggctctcctgagtcacaaggcctttgctgactccaggagattaaccgccagc
ccaagagaggcagcaatgcatgatgacttctttgcatatgacgaagacgggactcgcttt
tctcatgacatcacaccgatcatcctggcatctcactgccacgagtatgaggtcgtccac
atcctgctgactagaggggctcgtattgagcaaccacatgactatttctgtacctgtgac
acctgcaattaccatcagaaatacgattcattcagtcactcatgttcacgtatcaatgcc
tacagaggcctggccagtccagcgtacctctctctgtccaatgaagatccagtgctggct
gctttagagctcagcaatgaacttgcctgtttggcaaatattgagaaggaattcaagaat
gattataggaaactctctatgcaatgcaaaagctttgtagttggacttctggatctgtgt
cggaacacagaggaagtggaagccattttgaacggcgaagtagatgagagctctgaacta
cctggccgaccaagtctcaagcgactgaaccttgcaataaagtatgaacttaaaaagttt
gttgcacatcctaattgccagcagcagctcctctcaatctggtatgagaatctgtctgaa
ttgagacagcagaccacagccatcaagtttttggtggtcctgggtgttgcaataggactg
cccttcttatccatcatatacttggtggcaccttgtagtaagctgggaaaaattatgcga
ggcccttttctgaagtttgtggctcatggagcgtctttcactattttccttggcttgtta
gtattcaatgcagctgatcgctttgatgggagcaaactgttgccaaatatgaccgtccat
gactatccggcccagctgttccgcatgaaaacaactcctttcacatggatggagatgctc
ataatcttctggataatagggatgatctgggctgaatgcaaagagatctggtgtcagggt
ccaagagagtacctccttgaaccttggaatatgttggattttggaatgttagccattttt
atagcctcctttgtcacaaggatactggcttactggcatgcatctaaagcacaaagttat
gttgatgaacactacacagacataacaaatgtgacgttaccaccagaggtcgaatacttc
agactggctcgtctgttctggctgccatcagatccacagctgatttctgaagggctgtat
gccattgcggtggttttgagtttctctcgaattgcgtatatccttccagccaatgagagt
tttggaccactgcaaatctctttgggaaggactgtaaaagacatcttcaaattcatggtg
atcttcattctggtctttctggccttcatgatcggaatgttcaacctgtattcctattat
ttgggggctaaacagaatgacgctttcacaacaatagaagaaagcttcaaaacactgttt
tgggccatttttggactctctgaggtcaagtcagtggttgtgaacaacaaacacaagttc
atcgagaacaccggttatgtgctctatggagtgtataatgtcacgatggtcattgtgttg
ctcaacatgctcattgcaatgatcaacagctcctttcaggagatcgaggacgatgcagat
gtggagtggaaatttgcccgggccaaactctggttttcctattttgaagagggtagaacc
ctccctgtgcctttcaatctggtaccaagcccaaagtctgtgtatggccttgccctgggt
ttaaagtcgctgctggtgaaactcttcgacaaacacagagccattatgaagaacgaagca
gaactcagtgagttaggggagaacaaaaccaacaaaatgaggagtcatcgatatcagatg
attatgaagcgcctgatcaagcggtacatcatcaaagctcaaatggacaaagaatctgat
gaagtcaatgagggtgaactgaaggaaataaagcaagacatttccagtttgcgctacgag
cttcttgaagaaaagtcgcacaacatggatcgcatggctgaacttatcagtaaacttgaa
cagtgtgtctgtttgcataatgtgaaatag
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