Neoarius graeffei (lesser salmon catfish): 132897176
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Entry
132897176 CDS
T10798
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132897176 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132897176 (ap4b1)
Membrane trafficking [BR:
ngra04131
]
Endosome - Golgi transport
Others
AP-4 complex
132897176 (ap4b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
Hda_lid
Motif
Other DBs
NCBI-GeneID:
132897176
NCBI-ProteinID:
XP_060794574
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All DBs
Position
13:78673551..78721849
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AA seq
744 aa
AA seq
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MPYFGCEETVKDLKRALSNPNVQADRLRYRNYITQVIRCMTEGVDVSSVFMEMVKASATV
DVVQKKLVFLYMVTFAGVKPDMALLAINTLRKDCDNPNPMIRGLALRNMCNLRMPGIIEY
IHQPVMNALRDKSSYVRRVAVLGCAKIHSLQPDAEIDGGTVNELYSLLRDPDPVVMVNCL
RALEEILHHEGGVVINKPIAHHLITRLKDLDSWSQSEVLTFLLRYRPRNDDELFDILSLL
DTFLLSAQPPVMAATLRLFLHLAAAHPTVQADALTRARGPLLAACAATAREMRFTALCHV
QQVLRSQPTSYGSHYKRFFCAFSEPTYVKLRKMEILVELVNDENVALILEELKSYCTDVS
TELAQAAIKAIGRIGQTYTEKCLEILTGLLALKQEHITSAVLQTYRDLAWFCPQSTAAVC
HAIEGCDDLPQDDEGKQALLWLLGVHGDQISSAPYVLEGFIDRIKMEISSAVKMELLTAS
LKLFLSRPAETQDMLGRLLHYCIEEDGDMCVHDRALLYYRLLQCGVNETRKVLLGPKSDP
SMTIITGRTEEPVNHWASSFNTLDPLLGAESRAQDVPAEISDGDDEIRINDPDQAFQNGT
LREAGDTNHTPDAPEEPKLSLSPLVSHDAFEKLWMELPVLHHQCLGVPRPSVSPDTLNSA
FQLVKIQILAYSRSDARPWKLYMYSWSGGSLILAELLEDGADNPHHRGNLTLSIKQHPEE
QEAVEGFVSVVLNVLRTLSSVNSN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatttcgggtgtgaggaaacagtgaaggacctaaagagggcgctgtccaatcca
aatgtccaagcagacaggctccgctacagaaattacattactcaggtcataaggtgtatg
acggagggcgtggacgtgtcgagtgtgtttatggagatggtgaaggcgagtgcgacggtg
gacgtggtgcagaagaagttagtgtttctctacatggtgacgttcgccggagtgaaaccc
gacatggctctgctcgcaataaacacgctgaggaaggactgcgacaatcccaaccccatg
atccgcggcctggcgctccgcaacatgtgcaacctcaggatgccagggataatcgagtac
atccatcagccggtcatgaacgccctgcgcgataaatcatcctacgtgaggagagtggct
gtgttaggatgcgccaaaatacacagcctccaacccgacgcagagatcgatggtggcacg
gtgaacgagctctactctctgctcagagaccccgaccctgtagtgatggtaaactgtctg
cgtgctctggaggagattttacaccatgaaggaggcgtcgtcatcaacaaacccatcgca
caccacctcatcaccaggctgaaggatttggacagctggtctcagagtgaagttctaaca
tttctcctgcgttaccgtccccgtaacgatgacgagctcttcgacatcctcagcctactc
gacaccttcctgctcagcgctcagccacccgtcatggccgccacactccgccttttcctc
catttggccgccgcccaccctacagtgcaggctgacgccctcacgcgtgctcggggcccc
ctgctggccgcctgcgctgctacagcacgggaaatgcgcttcaccgcgctctgccacgtc
cagcaggtcctccgcagccagccgacttcatacggcagccattacaaacgcttcttctgc
gctttctctgaaccgacgtatgtcaaactccgtaaaatggagattctggtggagctggtg
aatgatgagaatgtagcactgatcctggaggaactgaagagttactgcaccgatgtctct
actgaactggcgcaggccgccattaaagccatagggcgtatcgggcaaacgtacactgag
aagtgtttggagatcctgacaggattgttggcactaaagcaggaacatatcacttctgct
gtgttacagacgtacagagacctggcatggttttgccctcaaagcactgcggctgtgtgt
cacgccatcgaggggtgtgacgatctccctcaggacgacgagggaaaacaggctctgtta
tggctacttggagtgcacggtgaccagatcagtagcgccccgtatgtgctggagggcttc
atagacagaataaagatggagatctcctctgcagtgaagatggaactgctcacagcatcg
ctgaaattatttctgtctcgaccagcagagactcaggacatgctgggccgtctcttgcac
tactgcatcgaggaggacggtgatatgtgtgtgcatgatcgagctctgctctactacaga
ctcctgcagtgtggagtgaatgaaacccgcaaggttctcctgggacctaaatcagacccg
tccatgaccatcattactggtcgaaccgaggaacctgtcaatcactgggcttccagtttt
aacacgctggatcctttgttaggagccgagagccgtgcgcaggacgttcctgcagagatc
tcagatggagatgatgaaatcagaatcaatgatccagatcaggcctttcagaatgggacg
ctgagggaagcaggagacactaaccacacacctgatgccccagaagaaccaaagctatct
ctgagtcctctggtgtcccatgatgcctttgaaaagctgtggatggagctgccggtgctg
catcatcagtgtctgggcgtccctcgtccctctgtctcacccgacactctaaactccgcc
ttccagctggtgaagatccagatattggcgtatagccggagtgacgctcgtccctggaag
ctctacatgtacagctggagcggaggcagcttgatacttgccgagctcctggaggacgga
gctgacaatccacatcaccgtggcaacctcacactgtccatcaaacagcatcccgaggag
caagaagcagtcgaaggcttcgtgtctgtggtcttaaacgtcctgcgcactctgagctcg
gtgaactcaaactga
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