Neoarius graeffei (lesser salmon catfish): 132898125
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Entry
132898125 CDS
T10798
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04140
Autophagy - animal
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132898125 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132898125 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132898125 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
132898125 (plekhm1)
Membrane trafficking [BR:
ngra04131
]
SNARE
SNARE associated proteins
Others
132898125 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
132898125 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
PH_6
Motif
Other DBs
NCBI-GeneID:
132898125
NCBI-ProteinID:
XP_060795509
LinkDB
All DBs
Position
14:31822832..31885169
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AA seq
1012 aa
AA seq
DB search
MLATQLADSVLEAKNAIQWIKEKMAQTLKTLQKRYVTTDAPVTSEDSEANELCCALEAVF
IHGLRSKHIRTDGAGARNRKGGSLPQPVFWNLLKAITHRDVILELESLSFINSDVGRCRA
WVRLALNDGLLECYLTSLLRESTKLGAHYQPGALLLDPEEREVLLSLLQGLASLAFQLSY
KSAVLNEWTTTPLALAGLCPPLPTDDLWPPSSHRESWDTASQSSGSVGSGRGQEGRTPSD
LSLDTAGSCHLSSSFGSERESWSCQTENKSALAEMSSSSSQDIIKDLDVLSPAADSMIES
SMHSSSDEDSSNKQDVHQMDLEPSTDSSIPNTHSVVLKEELLEEEITEPTTALVNTRPII
AESLKVDDKKQDEDSPAISLDTSSPMLTCQVTSNSLAASTLAPLISNAVELVNNSENDSF
HHTSEALSRQISAGSVCSRHNSRSWISEEDIYKPDSYASGDSEDPDVVDSSQINGTVSPA
AEPEFHPSPPSVVHRRQIGLSNPFRGLLKLGQLERRGPVGLWRACYCELSPFELRLYADD
EERNICENRSLLRCEDVQLGSDGRFHLEFPGKKLHLRAPSKAEAEDWVERILEAVRNVRH
QPQEDWDDLSPSTMAVSIPSEPFNPPAIDWNRPCEPEPDAIKEAVVLLSREEQGSRLMVL
SLSLEVLQGFSMQNGCKMRVFSHGIDAVRDVVPAVALGGPAFFKVLTANETLTVQAESGE
EAGAWRSLIRRALDSYLEEENETGAEITSLSGGNIHRLVQHRLKGDAVLLPHLTTVPKAK
GLNAQNFKCAGCSRQIGASLGRARLCEFSGQYYCDACHYGDTTIIPSRVVHNWDLAAREV
SRQALKLLTDIEQEPLLNLDLLNPDLFDHTETMATVQRLRQRLRLLGDYLLICRSGIRKK
VEAKLQQRTYLLESSHLYSVLDFRQIVDSQYESFLQSLIRFSCNHVHHCDLCTQRGFICQ
ICNADDIIFPFQFDTTSRCKACKTVFHSSCKTQSVVCPRCERLQRYKERDLE
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaacacagctcgctgattctgttttagaggccaaaaatgccatacagtggatc
aaggagaagatggcgcagacgctgaagacgctgcagaagcgctacgtgaccacagatgca
ccggtgaccagcgaggactccgaggccaacgagctgtgctgtgctctggaagccgtcttc
attcacggcctccggagtaaacacatccgcacagatggcgcaggagcacgcaaccgcaaa
ggaggctcgcttcctcagcccgtcttctggaacctgcttaaagccatcactcacagagac
gtgattctggagctagagagcctgagcttcatcaactcggacgtaggccggtgcagggca
tgggtgcgtctggcactgaacgatggcctgttggagtgctacctgacttcacttctccgt
gagagcaccaagctgggggcccactaccagcctggtgcgcttctccttgaccctgaggag
cgtgaggtgctgctcagccttctgcagggcttggcctcgcttgctttccagctctcctac
aaatccgcagtgctcaatgagtggaccaccacgccgctggcacttgccggtctatgtcca
ccgctgcctactgatgacttgtggcctccctcttcacaccgagaatcctgggatacagca
tcacagtcatctggatctgtgggttcagggagaggtcaggaaggcaggacgccctcagac
ctcagtttggacacagctggctcttgccatctctcttccagcttcggctcggagagagag
agctggagctgccaaacggagaacaagagcgcgcttgcagaaatgagtagctcctctagc
caggatataataaaagacctagatgtgcttagccctgctgcagatagcatgattgagtcc
tccatgcacagcagtagtgatgaagactcctcaaacaaacaggatgtacaccaaatggac
ctcgagccttccacggattcatccatcccaaacacgcactcggttgttttgaaggaagag
ctattagaagaggaaataacagagcctacgactgcccttgtaaatacaagaccaataatt
gctgagtctttgaaagtagatgataagaagcaagatgaagactctcctgccatttcctta
gatacctcctcccctatgttaacctgtcaggtgacttccaactcattggctgccagcact
cttgctccattgatttccaatgctgtcgagttggtaaacaactctgagaatgattctttc
catcacacttctgaagctctgagcaggcaaatatctgcaggctctgtctgttctcgccat
aattccaggtcctggatctcagaggaggatatttataagccagattcctacgcaagtgga
gattctgaagatcctgatgttgtagattcctcccagattaacgggacggtatctcctgct
gctgaacctgaattccacccatctccacctagtgtggttcatcgtagacagattggcttg
tcaaatccatttcgaggccttttaaagctgggccagctggagcggcgtggtccggtgggt
ctgtggcgtgcctgctactgcgagttgtcaccatttgagctgcgcttatatgctgacgat
gaggagcgtaatatctgtgaaaaccgctcgctgctgcgctgtgaggatgtgcaactgggc
tccgacggccgcttccatctcgaattccccggaaagaagctccacctgcgtgcaccaagc
aaagccgaggctgaggactgggtagagcgcattttagaggctgtaaggaatgtgcgacac
caaccgcaagaagattgggatgatctctcaccctctaccatggccgtctccataccctct
gagccatttaatccgcctgcgatagactggaacaggccctgcgagccagaaccggatgcc
ataaaggaggcagtggtgctcctgagtcgggaggagcaaggttcacgtctgatggtgctg
tctctctcgttggaagtgcttcaaggtttctcaatgcagaatgggtgcaaaatgcgtgtt
ttctctcatggcatcgatgctgtaagggatgtggtccctgctgtggcgctgggtggccct
gccttcttcaaggtgctgacagcaaatgagacgctgacggtgcaggccgagagtggcgag
gaggccggtgcctggagaagccttatccgaagggctctggattcatacctggaggaggag
aatgagacaggtgctgaaataacatcactgagtggaggcaacatccacagacttgttcag
cacaggctgaagggggatgcggtcctgctgccccatctgacaactgtccccaaagcaaaa
gggttaaatgcacagaacttcaaatgtgcaggctgttccaggcagattggtgcatctttg
gggcgagctaggctgtgcgagttctcaggtcaatactactgtgatgcctgtcactatggt
gacaccaccatcatcccctctcgcgtggtgcacaactgggatctcgctgcacgtgaggtc
tccagacaggccttgaagctgcttactgacattgagcaggagcctttgctaaaccttgac
ctcttaaaccctgacctgtttgatcacactgaaaccatggcaacagtacaacgcttgagg
cagagactccgcctcctcggagactacctgctcatttgtcggagtggaatccggaaaaaa
gttgaggccaagttgcagcagagaacctacctattggaatcaagccatctgtatagcgtg
ctggacttcaggcagatagtggacagccagtacgagtccttccttcagtctctcatccgg
ttctcatgcaatcacgtgcatcactgcgacctctgcactcagcgaggcttcatctgccag
atctgcaatgcggacgacatcatttttccttttcagtttgataccacttctaggtgtaag
gcgtgcaaaactgttttccactcctcttgtaagacccagagtgtcgtttgtcctcgctgt
gagcgtctgcagagatataaggagagagaccttgagtaa
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