Neoarius graeffei (lesser salmon catfish): 132900445
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Entry
132900445 CDS
T10798
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04218
Cellular senescence
ngra04514
Cell adhesion molecules
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132900445
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132900445
04145 Phagosome
132900445
09143 Cell growth and death
04218 Cellular senescence
132900445
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132900445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132900445
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132900445
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132900445
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Antigens
132900445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
Ig_2
Ig_3
C2-set_2
CAP_GLY
Phage_cap_E
Motif
Other DBs
NCBI-GeneID:
132900445
NCBI-ProteinID:
XP_060798520
LinkDB
All DBs
Position
16:14378207..14447121
Genome browser
AA seq
458 aa
AA seq
DB search
MAHCTLMNVLLWHSLSVHLSFAVTHKLQYLYTAVTPGMNFPEYTDVGLVDGELFVYYDSN
IRKYIPKTEWIQKVTDSDADYWNSGTQNQQAAEEVYKEDIATLMQRFNQTEGVHTLQRLY
GCEIDDDGTVRGYDQLGYDGDDFISLDLKSVTWTAAKPQAVITKNKLDATGTAHADKHYL
ENRCIEWLQKYVSYSREILERKVRPEVSVFQKHSSPEVVCHATGFFPKSVNITWQKDGED
VYVGVELSETLPNHDGSFQKRSVLKVPAEALQKHNYTCVVQHSSLQEEIVMPVSQILRGQ
RNISSSSALSGTGSWRQQSKQGSPNFPFPRHLGQLLGKNTEAFPGQPRDIVPPACPGSSP
GPPPGGTCLEHLPREASRRHPKKMPEPPQLIPLDVEQQRLYSELLPNDCASHPISKGAPS
HPAKETHFGRLYPRSCPFGHYPKLMTIGESRNVDRPVN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctcactgcacattaatgaatgttttgctttggcattccctttctgtccatctgtcg
ttcgcagtcacacacaagctccagtacctctacactgcagtcacaccaggaatgaatttc
ccagagtacactgatgttggtctggttgatggagagctatttgtgtactatgacagcaac
ataaggaaatacatcccaaaaacagagtggatacagaaggtcactgattctgatgcagat
tactggaacagcgggacacagaatcagcaagctgcagaggaggtctacaaagaagatata
gctacactaatgcagcgctttaatcagactgaaggagttcacacactacagaggctgtac
ggctgtgagattgatgatgacgggactgttagaggatatgatcaattaggttatgatgga
gatgatttcatcagtctggatctgaaatctgtcacctggactgcagctaaacctcaggct
gttatcaccaaaaacaaactggatgctacagggactgctcatgctgacaaacactatctg
gagaacaggtgtatcgagtggttacagaagtatgtgtcttacagcagagagattctggag
aggaaagttcgtcctgaggtatccgtcttccagaaacactcgtctccagaggtggtgtgt
cacgctacaggtttcttccctaaaagtgtgaatatcacctggcagaaggatggagaggac
gtgtatgtgggtgtggagctcagtgagacgttacccaaccatgatggaagtttccagaag
agaagcgttctgaaagtcccagctgaggcgctgcagaaacacaactacacctgtgtggtt
cagcacagcagcctgcaggaggagatagtgatgcctgtgagccagatcctgagaggtcag
agaaacatctcgtcttcttccgctttatccgggaccgggtcgtggaggcagcagtctaag
cagggaagcccaaacttccctttccccagacacctcggccagctcctcgggaagaacacc
gaggcgttcccaggccagcccagagacatagtccctccagcgtgtcctgggtcttccccg
gggcctcctcccggggggacatgcctggaacacctccccagggaggcgtccaggaggcat
ccgaaaaagatgcccgagccacctcagctgattcctctcgatgtggagcagcagcggctc
tactccgagctcctcccgaatgactgtgcttctcaccctatctctaagggagcgcccagc
caccctgcgaaggaaactcatttcggccgcttgtatccgcgatcttgtcctttcggtcat
tacccaaagctcatgaccataggtgagagtcggaacgtagatcgaccggtaaattga
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