Nocardiopsis gilva: CDO52_22585 Help Entry CDO52_22585       CDS       T05022                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ngv  Nocardiopsis gilva Pathway ngv03030   DNA replication ngv03410   Base excision repair ngv03420   Nucleotide excision repair ngv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ngv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CDO52_22585    03410 Base excision repair     CDO52_22585    03420 Nucleotide excision repair     CDO52_22585    03430 Mismatch repair     CDO52_22585  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ngv03032]     CDO52_22585    03400 DNA repair and recombination proteins [BR:ngv03400]     CDO52_22585 Enzymes [BR:ngv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CDO52_22585 DNA replication proteins [BR:ngv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CDO52_22585 DNA repair and recombination proteins [BR:ngv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CDO52_22585    NER (nucleotide excision repair)     GGR (global genome repair) factors      CDO52_22585    MMR (mismatch excision repair)     DNA ligase      CDO52_22585   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CDO52_22585 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH Nlig-Ia HHH_3 HHH_8 Auto_anti-p27 DUF4796_N Motif Other DBs NCBI-ProteinID:  ASU85207 UniProt:  A0A223SAP5 LinkDB All DBs Position complement(5080349..5082529) Genome browser AA seq 726 aa AA seqDB search MSAEKPAATDGIPAAVRERHAELCQEIDDHSYRYYMQNPIISDAEYDELVAELRAIEDAH PELITQDSPTQKVGAPISVDFAAVEHLRRMESLDNAFSADELLAWTQRASGELPIDAYLC ELKIDGLAVDLIYENGRLVTAATRGDGRVGEDITLNVRTIDVVPDRLDESVRPAPELLEV RGEVFLPEDAFKELNARLTGEGKAPFANPRNAAAGSLRQKDPRVTATRPLSMLVHGVGEH RGVEITHQSHAYDLLRDWGLPVSDRYRVVTTTEEVRTYVDYYGEHRHDPEYEIDGIVVKV DDVALQRRLGSTSRAPRWAIAYKYPPEEVTTKLIDIKVGVGRTGRVTPYGVMEPVTVAGS EVEFATLHNAQEVERKGVLIGDTVTLRKAGDVIPEILGPVVDLRDGTERAFVMPETCPEC GSPLGQQKEGDVDLRCPNARSCPGQLRERVFYVASRKALDIEALGYVAATALTQPLEPEE PPLTDEGDLFDLTVEQLLPIRTLVLDPDTTEPKPDPKTGEPKVVTFFANQKGEPKKTVEK LFEELEQAKSRPLWRVLVALSIRHVGPRAAEDLARHFRSMDAIAEASEEELASVDGIGPT IAQSIVEWFTVDWHREIVRKWRDAGVRMAEEGAGSGPRPLDGVTVVVTGSLEGFTRDGAK EAVAEQGGKATSSVSKKTGFVVVGDSPGSKYDKAVKLGVPVLDEDGFTVLLEKGPEAAME RRLPTE NT seq 2181 nt NT seq  +upstreamnt  +downstreamnt gtgagcgcggaaaaaccggcggccactgacggtatccccgcggcggtgcgcgagcgccac gccgagctgtgccaggagatcgacgaccacagctaccggtactacatgcagaatccgatc atctcggacgccgagtacgacgaactcgtggccgagctgcgcgccatcgaggacgcacac cccgagctgatcacccaggactcgcccacgcagaaggtcggcgcgcccatcagcgtcgac ttcgcggcggtcgagcacctgcggcgcatggagagcctcgacaacgcgttcagcgccgat gagctcctggcctggacgcagcgcgccagcggcgagctccccattgacgcctacctgtgc gagctgaagatcgacggcctggccgtggacctgatctacgagaacggccgactggtcacc gccgccacccgcggcgacggccgggtcggcgaggacatcacgctcaacgtccgcaccatc gacgtcgtccccgaccggctcgacgagagcgtccgccccgcccccgagctgctggaggtg cgcggtgaggtcttcctcccggaggacgccttcaaggagctcaacgcccggctgacgggc gagggcaaggcgccgttcgccaacccgcgcaacgccgccgccggttcgctgcggcagaag gacccccgggtcaccgccacccgcccgctgagcatgctggtgcacggggtgggcgagcac cggggcgtggagatcacccaccagtcgcacgcctatgacctgctgcgcgactggggcctg ccggtcagcgaccgctaccgcgtggtgaccaccaccgaggaggtgcgcacgtacgtcgac tactacggcgagcaccgccacgaccccgagtacgagatcgacggcatcgtggtcaaggtg gacgatgtcgccctgcagcgccgcctgggatccacgagccgtgccccgcgctgggcgatc gcctacaagtacccgcccgaagaggtcaccaccaagctgatcgacatcaaggtgggcgtg ggccgcaccgggcgcgtcacgccgtacggcgtcatggagccggtcaccgtcgccgggtcc gaggtggagttcgcgacgctgcacaacgcccaggaggtcgagcgcaagggcgtgctcatc ggcgacaccgtcaccctgcgcaaggccggggacgtgatcccggagatcctcggcccggtc gtcgacctgcgcgacggcaccgagcgcgccttcgtgatgccggagacctgcccggagtgc ggctcgccgctgggccagcagaaggagggcgacgtcgacctgcgctgccccaacgcgcgg tcctgcccggggcagctgcgcgagcgcgtgttctacgtcgccagccgcaaggccctggac atcgaggcgctgggctacgtcgccgccaccgccctcacccagccgctggagccggaggag ccgccgctcaccgacgagggcgacctgttcgacctgaccgtggaacagctgctgccgatc cgcaccctggtcctggaccccgacaccaccgagcccaagcccgaccccaagacgggcgag cccaaggtggtgaccttcttcgccaaccagaagggggagccgaagaagacggtcgagaag ctgttcgaggagctggagcaggccaagagccgcccgctgtggcgggtgctggtggcgctg tcgatccggcacgtcggtccgcgcgccgccgaggacctggcccggcacttccggtccatg gacgcgatcgccgaggcgtccgaagaggagctggcgtcggtcgacggcatcggccccacc atcgcgcagtccatcgtggagtggttcacggtcgactggcaccgcgagatcgtccggaaa tggcgcgatgccggggtcagaatggcggaggagggtgcgggcagcgggccgcgcccgctg gacggcgtcacagtcgtcgtcaccggctctctggagggcttcacccgcgacggcgccaag gaggccgtggccgagcaggggggcaaggccacgtcgtcggtctcgaagaagaccgggttc gtggtggtcggcgacagccccggaagcaagtacgacaaggccgtgaaactgggcgtcccg gtcctggacgaggacggcttcaccgtcctcctggaaaaggggccggaagcggccatggag cgccggctgcccaccgaatga

DBGET integrated database retrieval system