KEGG   Nitrobacter hamburgensis: Nham_0162
Entry
Nham_0162         CDS       T00348                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
nha  Nitrobacter hamburgensis
Pathway
nha03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Nham_0162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nha03400]
    Nham_0162
Enzymes [BR:nha01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Nham_0162
DNA repair and recombination proteins [BR:nha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Nham_0162
 Prokaryotic type
     Nham_0162
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: ABE61063
UniProt: Q1QRT4
LinkDB
Position
182236..183024
AA seq 262 aa
MGQAPAAKPRKRAATPEAGAASKAILPAAKRPAKPARRSARGSAAPTPPLRPWTVAEIRE
AFVRFRNANPEPKGELEHLNPYTLLVAVVLSAQATDAGVNKATRALFAVADTPARMLALG
EEKVRDHIKTIGLYRNKARNIIALSEKLLADFNGEVPRSRAGIESLPGAGRKTANVVLNM
AFGEHTMAVDTHVFRVGNRTGMAPGKTPLEVELGLERVIPDEFMLHAHHWLILHGRYTCL
ARSPRCAVCLINDLCRWPEKTI
NT seq 789 nt   +upstreamnt  +downstreamnt
ttggggcaggctccggcggcaaaaccgcggaaacgggcggcgacacccgaggccggggcc
gcctccaaggccatcctgcccgccgccaagcggcccgccaagccggcacgtcggtcggca
cgtgggtcggcggcgcccacgccgcccctcaggccctggacggtggccgaaatccgggaa
gccttcgtgcggttccgcaacgccaatcccgagccgaagggcgaactcgagcacctcaac
ccctacacgctgctggtcgcggtggtgctgtcggctcaggcgaccgacgccggtgtcaac
aaggcgactcgtgccctgttcgcggtcgccgatacgcccgccaggatgctggcgctcggc
gaggagaaggtccgcgatcacatcaaaaccatcgggctctatcgcaacaaggcgaggaac
atcatcgcgctgtcggaaaaactgctcgcggacttcaatggcgaagtcccgcgcagccgc
gccgggatcgaatcgctgcccggcgcgggacgcaagaccgccaacgtcgtgctcaacatg
gcgttcggagagcacacaatggcggttgacacccatgtcttccgcgtcggcaaccgtacc
ggcatggcgccgggcaagacgccgctcgaggtcgaactcggacttgagcgcgtgatcccg
gacgagttcatgctgcatgcgcatcactggctgatcctgcacggacgctacacctgcctg
gcgcgatcgccgcgctgcgcggtgtgcttgatcaacgacctgtgccgctggccggaaaaa
acgatctaa

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