Nitrobacter hamburgensis: Nham_3539
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Entry
Nham_3539 CDS
T00348
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nha
Nitrobacter hamburgensis
Pathway
nha01501
beta-Lactam resistance
nha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Nham_3539
01503 Cationic antimicrobial peptide (CAMP) resistance
Nham_3539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nha03036
]
Nham_3539
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nha02000
]
Nham_3539
01504 Antimicrobial resistance genes [BR:
nha01504
]
Nham_3539
Chromosome and associated proteins [BR:
nha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Nham_3539
Transporters [BR:
nha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Nham_3539
Antimicrobial resistance genes [BR:
nha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Nham_3539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
BSH_CzcB
YknX_C
BSH_CusB
HH_MFP_RND
Beta-barrel_RND_2
CzcB_C
KR
AbiEi_4
DUF1344
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
ABE64268
UniProt:
Q1QHM9
LinkDB
All DBs
Position
complement(3894075..3895283)
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AA seq
402 aa
AA seq
DB search
MPRFNSRLTSVALLIAGLSPLLGGCDEPVTAEASTSAITPEVSVVTVVPKPHAMVRELPG
RIAPLRVAEVRPRVSGIITERLFEQGSEVKAGDPLYQIDSKPFAVELQAAEAALAKADAV
FEQASHHARRIEKLTARHATSEAENEKAIANMRQAEADVAGRQADRARARLHLDYTTIRA
PIGGVVGAAQVTEGALVVQNETASLTTVQQLDTIYADFTQSVSELNSLRRAFESGELERI
APGAAKVRLVLDDGTLYPLPGKFLFSEAKVDASTGQVTLRGEFPNPKRELLPGMYVRVLL
EQGVDSDAIAVPQQAVQRDTSGGSEVFVVRDDDRVIARPIRTASVQDGLSMVSQGLKAGD
RVVVEGFQKFTAGDKVRTVMWAEADASRETGALTGATAVARQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgccaagatttaattcacgactgacgtccgtcgctttgttgatcgccggattgtcgccg
ctgcttggcggctgcgacgagcccgtcaccgcggaagcctcgaccagcgcgatcaccccg
gaagtcagcgtcgttacggtggttccgaagccgcatgcaatggtgcgcgaactgccgggc
cgcatcgcgccgctgcgcgttgccgaggtgcgcccccgcgtctccggcattatcaccgag
cgcctgttcgagcagggcagcgaggtcaaggctggcgatccgttgtatcagatcgattca
aaaccgttcgcggtcgaattgcaggcggcggaggcagcgctggcaaaggccgacgccgta
ttcgagcaggcgtcgcatcatgcgaggcgcatcgaaaaactgacggcccggcacgccacc
tccgaggccgaaaacgagaaagcgatcgccaacatgcgtcaggccgaggccgatgtcgcc
ggtcgccaggcggaccgcgcgcgggcgcggctccatctcgattacaccaccatccgggcg
ccgatcggcggcgtggtcggcgcggcccaggtcaccgagggcgcgctcgtcgtccagaac
gagacggccagcctgaccacggtgcaacaactcgacaccatctacgccgacttcacccag
tcggtgagcgaactcaacagcctgcgccgtgcattcgagagcggcgaactggagcgcatc
gcgccgggcgcggcgaaagtccgtctcgtgctcgacgatggaacgctctacccgctgccc
ggaaaattcctgttttccgaagccaaggtcgatgcctcgaccgggcaggtgacgctgcgc
ggcgaatttccgaatccgaagcgcgaactgctgccgggtatgtacgtccgcgtgctgcta
gagcagggcgttgacagcgatgcgatcgccgttccgcagcaggcggtgcagcgcgacacc
agcggcggcagcgaggtcttcgtcgtcagggacgacgatcgcgtgatcgcgcgcccgatc
cggacagcgtccgtccaggacgggctgtcgatggtcagccagggactcaaggccggcgac
cgcgtcgtggtcgagggcttccagaaattcaccgccggcgacaaggttcgcaccgtgatg
tgggcggaagccgatgcttcgcgggagaccggagcgctgacgggcgccacagcggttgcc
cggcagtag
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