Fusarium vanettenii: NECHADRAFT_48724
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Entry
NECHADRAFT_48724 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NECHADRAFT_48724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhe03400
]
NECHADRAFT_48724
Enzymes [BR:
nhe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NECHADRAFT_48724
DNA repair and recombination proteins [BR:
nhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NECHADRAFT_48724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
9665446
NCBI-ProteinID:
XP_003050083
JGI:
48724
UniProt:
C7YU87
LinkDB
All DBs
Position
9
AA seq
926 aa
AA seq
DB search
MPLPFALVCDLLEESHELSVAKKSNLSTVAKWFARHRSWINAHNTSLAALLSTLLPDKRT
DRVYCIQTATLEKIIGRAFFLGSSRIAELSHYRQPGQGIDLADCVSRILNATPSPGYSKD
NLVTVEEIDKILHSLAARASLTQSNRGDLEWLYRRLSSVEAKWFTRLVLKNYQPLVLDPP
LIYRLCDPILPCVLKIQDDFSTAINSVQAIRGRLLPNAARKTPREQILSSVKPQLGIKVG
RQPWVKGRSIKNCLDMGHGRMSVEDKIDGEFCQIHIDLSKGENCIQIFSKSGKDSTEDRE
ALHGTILESLQIGKPGAKVTKACILEGELVAFDDSILSSLIAYRKGWSELVQRQVIDFGH
NLGASSLRKAFALTILARKEGLVLKPDEPYFDFADQRRKFSSCCIKLKKEYIGNFGDVGD
FAVVGARYDPAKAMAYRISGLKWTHFYLGCLDNREAVKQWNAKPEFTIVNVVELNETILR
EVVTYANPQSVVAEENDQLTLKLAPGVEQGSPLTFVFTKPLVFDLRCFSFDKVGNTSFWS
LRFPSVTKVHFDRDFTDTISFEQLQTMAKDATTAGELEDSQENLQWVAKLEGADPRGIAV
DAVSQLTVTTMPTPSPRKSTQNTTSSCSPTSPLVTKFPLLQTGPSHARSGPPLRLPGVPP
ATPPTSAAQAALASWPAEGPTRNKRFSPTSMPAPPPKRQKSVTENVQASTSSNNGSSSQP
RKPLTNINGNSHGAISSSCSVHQNRLGKEVPEVIDLTLSQGTPSITKLPALQTAQCSPPA
DGVTATTIDTCRFAGTKCHMAGTRILISPGLFDNCKEAKALFDDHGIYGTVMNVDKWLES
EKACENHQTPVKTYLLVDSGRHDETKALLKKIEEIRGAISDRTRIWIDVHDWRMLKYVTI
KEDDNVTPKYYDGWHDPWRRWYIGIV
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccattcgctttggtttgcgacctgcttgaagagtctcacgaattatcggtt
gccaagaagagcaatttgagtaccgtagcaaaatggtttgcacggcaccgaagctggatc
aacgcacacaatacaagtctcgcggctttgttgtctaccctgcttcctgacaaaagaacg
gacagagtttactgcatacaaactgctaccctcgagaagattatcggccgcgcgttcttc
cttgggtcctctcgtattgccgaactgtcccactaccggcagccgggtcaaggcattgac
ctggctgattgcgtttcgcgtattctgaatgcaacgccaagtccgggttacagcaaggac
aaccttgtcacggtcgaagagatcgacaaaatccttcattctctggcagccagggctagc
ctcacccaaagcaataggggtgatctcgaatggctgtatcgccgactgagctcagtagaa
gccaagtggtttacacggctggtgctcaaaaactaccagccgcttgtcttagatccccct
ctcatttatcgactatgtgacccgattcttccttgtgttttgaagattcaagatgacttt
tccacggcaatcaactccgtccaggccattcgaggacgattgttgccgaatgccgctcgc
aagacaccgcgggaacaaattttgagttctgtgaagcctcaactcggtatcaaagttgga
cgacagccctgggtgaaagggcgtagtatcaagaattgtcttgacatgggtcatgggcga
atgagcgtggaggacaagattgatggggagttctgtcagattcatatcgatctgagcaaa
ggagagaattgcatccagatcttttccaaaagtggcaaagacagcactgaggatagagag
gcgcttcatgggactatactagaatcacttcagatcgggaaacctggcgcaaaggtcaca
aaagcatgcattttagaaggggagttggttgcattcgatgattcgattctctcaagcctt
atcgcctatcgcaaaggctggtctgaactagttcagcgtcaagtcattgactttggccat
aacctcggcgcctcaagtctacgtaaagcctttgccctcacaattttggcccgaaaggaa
ggcctggtcctgaaaccggatgaaccctatttcgattttgcagaccagcgtcggaagttt
tcgagctgctgcatcaagctcaagaaggaatacatcgggaactttggcgatgtcggtgat
ttcgctgttgtcggtgcccggtatgatccagccaaggcaatggcttatcgaatttccggg
ttgaagtggactcacttctatcttggttgtctcgacaatagggaggcagtcaagcagtgg
aacgcaaagcccgagttcactattgtcaatgtcgtggagttgaatgagacaattttgaga
gaggttgttacttacgccaatccccaatctgtggttgccgaagagaatgaccaactcact
ctcaagttggctcccggggtagagcaaggctcgcctctgacgtttgtcttcacaaagcct
ttggtgttcgatttgaggtgcttcagctttgacaaggtgggaaacacaagtttctggagc
cttcgcttcccttcagtcacaaaggttcactttgatcgggattttaccgacacaatctcc
tttgagcagttgcaaacaatggcaaaggatgcaaccacggctggtgagcttgaggacagc
caagagaacctccagtgggtcgcaaagctggagggagctgatccgcgtggcatcgctgtt
gacgctgtgagccaactcacagtaacaacaatgccaacgccttcgccgcggaagtcaacg
caaaatacaacatcttcatgttctccaacttctccgttggtcacgaaattccctctctta
caaacgggcccatcccatgcaagatccggaccaccacttcgtctgcctggagtgccacct
gctacacctcctacatctgctgcacaagctgcactggcttcgtggccagcagaaggtcca
acaaggaacaagcgtttctctcccacttccatgcctgcacccccgcccaaacgccaaaag
tcagtgaccgagaacgtgcaagcaagcacatcctcaaacaacggcagttcctcgcagcct
cgcaaacctctcacaaatataaatggcaactcccatggcgccatttcttcctcctgttct
gtacatcagaacaggcttggaaaagaagtacccgaggtcatcgacctcacgttgtctcaa
gggacaccctccatcacgaagcttcctgccttgcagactgctcagtgctcaccgccggca
gatggtgtaacagctacaacaatagacacatgtcgctttgctggtaccaagtgtcatatg
gcagggacacggattctaatatcaccggggctttttgacaactgcaaagaagccaaggcc
ctgttcgatgatcatgggatctatggcactgttatgaatgtcgataaatggctcgaatca
gagaaagcatgtgagaatcatcagaccccggtcaagacttatttgctggtcgacagtgga
cgtcacgatgagaccaaagccctgcttaaaaagatcgaggagatacgaggggccatttcc
gatcgcacccgcatatggatcgacgtccatgactggcgcatgctgaaatatgttacgatc
aaggaagatgacaatgtcacgccaaagtattatgacgggtggcatgatccgtggaggcgg
tggtacatcgggattgtttga
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integrated database retrieval system
