Candidatus Nanohalovita haloferacivicina: HBNXNv_0371
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Entry
HBNXNv_0371 CDS
T10381
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nhf Candidatus Nanohalovita haloferacivicina
Pathway
nhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBNXNv_0371 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhf03400
]
HBNXNv_0371 (nth)
Enzymes [BR:
nhf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HBNXNv_0371 (nth)
DNA repair and recombination proteins [BR:
nhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBNXNv_0371 (nth)
Prokaryotic type
HBNXNv_0371 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Ogg-HhH
HHH_5
HHH
Peptidase_M13_N
DUF2400
DUF5343
WIYLD
Cas9_a
Transposase_20
CRISPR_Cas2
Motif
Other DBs
NCBI-ProteinID:
WEL23226
LinkDB
All DBs
Position
333173..333895
Genome browser
AA seq
240 aa
AA seq
DB search
MEIDNSEERIRNIHQDLLDVYGEQNWHDNDDGVRQLLITILSQNVADTNTARAAENLFND
FKDYKEIEETSIEKLAESINPAGLPETKAKRIQRTLKALREHGDSEDYSVDFLGEMEDSD
AQAWLEEIKGIGPKTASVLLNFHFDANVMPVDTHVERIAKRFRLIPFSSSNGKAHELLNE
AVPHEIKNSFHMLMIEHGKNNCTARNPTCENTKLKKYCSYYEKVIEGDLTPEEYPPEAWE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgataactcggaagaaagaatcagaaacatccatcaggatctcctagatgtg
tatggagaacagaactggcacgacaacgacgacggcgtcagacagcttctcataacaata
ctctcacagaacgtagcagatacaaatactgccagagcagcggaaaatctgttcaacgac
ttcaaagactacaaagaaatcgaagagacctctatagaaaaactagcagaatccatcaat
ccagcaggccttccagagacaaaagccaagagaatacagagaacactgaaggccttgagg
gagcatggagattctgaggattactctgtggactttctcggcgagatggaggattcggat
gcgcaggcctggcttgaagagatcaaaggtatcggcccgaagactgcaagcgttttactg
aattttcacttcgatgcgaacgtcatgcctgtcgatacgcacgtggagaggattgccaaa
agattcaggctgattccattttcatcttcaaatgggaaggctcacgaattactgaatgag
gccgttcctcacgagatcaagaacagcttccacatgctgatgattgaacatgggaagaac
aactgcacagccagaaatcctacatgcgaaaatacaaagctgaaaaagtactgcagctac
tacgaaaaagttatcgaaggcgatttaacgcctgaagagtatcctccggaggcctgggaa
tag
DBGET
integrated database retrieval system
