Novosphingobium humi: PQ457_10345
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Entry
PQ457_10345 CDS
T08806
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nhum
Novosphingobium humi
Pathway
nhum01501
beta-Lactam resistance
nhum01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQ457_10345
01503 Cationic antimicrobial peptide (CAMP) resistance
PQ457_10345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nhum02000
]
PQ457_10345
01504 Antimicrobial resistance genes [BR:
nhum01504
]
PQ457_10345
Transporters [BR:
nhum02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PQ457_10345
Antimicrobial resistance genes [BR:
nhum01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PQ457_10345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
WCT76350
UniProt:
A0ABY7TTS9
LinkDB
All DBs
Position
complement(2202828..2205953)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKISAWAIRHPIPVAVIMIALTLAGIASYMMLPVKRFPNVEFPVVSVTVTQQGAAPSEME
QQITRPIEDALTGIAGLRHTTSNVRLGSSSTSAEFEIGTDMQKAVEDVRTAVERTRPVLP
QGIDAPSVQRVDMSSAPILTYAVSAPGMSAVDLSWFVDDTVARALQAQRGVAQVKRIGGV
AREINVTLDPDRMTAHGVTASSISTALAQFHRDDSGGRAEAGGREQTIRVLGSSATVDQL
RELNIPISATQYVRLGDLATITDSHAEERGFARLNGHPAIAFQVSKTTAASDVSVEDGVD
RAIARLAAENKGIVITKVVSTVTDTRNSYQATVHVLIEGMLLAALVVFLFLRDWRATVIA
ALAMPLSLVPTFGAMILFGFSLNIITLLGLTLVIGILVDDAIVEIENIQKRIEGGASPYR
ASLIGADAIGLAVVATTATIIVVFAPVSFMGGQSGQFFREFGLTVAVAVFFSLLVARFVT
PLMAAYFLKPSTHSEPPHRLRGAYPKVLDWALANPKSTVGIGIGVFVGALAIAATIPIGF
QPTGDPGYFYLSMQGTAGATHDTMDNAVRDVTARLRKLPDVERVFAQVGSTTTSGPGGGG
SGSDLQTGTLTVVLKRDRSMTTDQFQRSITGLLRQIPEVRLNNQGGFGAAGVEVVLAGRD
GDALARAQAALLREMRGMKTTLDPRPAPPPSAPELIIRPLPDAAARLNVSSQAIAQVARI
ATIGDIDANVAKFSTLQQRLSIRVRLPHDARVDLDQIGNLQVPTLNGKMTPLRTVADLSI
ASGPGQIQRYDRERRVSVQADLNGTTIGQALNEVSKLDAMKHLPAGVHEAKTGDSEAMAD
LFGGIVGAMASGILMIYFVLVMLFHSFFKPITILSALPLTMLGAFVALKVTGIAITLPVL
IGMLMLLGLAAKNSILLVEFAIEDERAGQPQREAIMNACRERARPIVMTTVAMAAGMLPT
ALGIGEGSTFRQPMAIAVIGGLISSTMLSLVMVPVVYELIDTLEMRLRPRLARLITPRAP
GDDDPIEPGQVTVVSATPDRA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttccgcatgggcgatccgccatcccattcccgtggccgtcatcatgatcgcg
ctgacgctggcgggcattgcgtcttatatgatgctgccggtcaagcgttttcccaatgtc
gaatttccggttgtttcggtcaccgtgacccagcagggcgccgcccccagcgagatggag
cagcagatcacgcgccctatcgaggacgcgctgaccggcattgcgggcctgcgccacacg
acatcgaacgtccggctggggtcttcgagcaccagcgccgagtttgaaatcggcaccgac
atgcaaaaggcggtcgaggatgtgcgcaccgccgtggagcgcacccgccccgttctgccc
cagggcattgatgcgcccagcgtgcagcgcgtcgatatgtcctcggccccgatcctgacc
tatgcggtcagcgcgccggggatgagcgcggtcgatctgtcatggtttgtcgatgacact
gtggcccgcgcgcttcaggcccagcgcggcgtggcacaggtcaagcgtatcggcggggtg
gcgcgcgagatcaatgtcacgcttgaccccgatcggatgaccgcgcacggcgtgacggcc
tcctcgatcagcaccgctctggcgcaattccaccgcgacgacagcggcggccgcgccgag
gcgggcgggcgcgaacagacgatccgcgtgctgggttcgtcggctacggtcgatcaactg
cgcgaactgaatattccgatcagcgcgacgcaatatgtccgccttggcgatctggccacg
atcaccgacagccatgccgaagagcgcggctttgcccgcctcaacggccacccggccatc
gcctttcaggtgagcaagaccacggcggccagcgacgtttcggtcgaggacggggtggat
cgcgcgattgccagactggcggccgagaacaagggcattgtaatcaccaaggtcgtctcg
accgtcaccgacacgcgcaattcctatcaggccacggtccatgtcctgatcgaaggcatg
ttgctggccgcgctggtggtgttcctgttcctgcgcgattggcgcgcgacggtgattgcc
gcgctggccatgcctttgtcgctggtgcccacctttggcgcgatgatcctgttcgggttc
agcctgaatatcatcacgctgctgggtctgactttggtgatcggcattctggtcgatgat
gctattgtggaaatcgagaatatccagaaacgcatcgagggtggggcatcgccctatcgc
gcctcgctgatcggggccgatgccatcgggcttgcggtggtggcgaccacggcaacgatc
atcgtggtctttgcgccagtctccttcatgggcggccaatcgggccagttcttccgcgaa
ttcgggctgaccgtggcggtggcggtattcttctcgctgctggtggcgcgttttgtcacc
cccttgatggcggcctatttccttaaaccttccacccacagcgagccgccacaccggctg
cgcggggcctatcccaaggttttggactgggcgctggccaatcccaaatcgacggtgggc
atcggcatcggcgtgtttgtcggcgcgctggcgatcgcggccacgatccccatcggtttt
cagccgaccggcgatccgggctatttctacctctcgatgcagggcacggcgggcgccacc
catgacacgatggacaatgccgtacgcgatgtgaccgcgcggctgcgcaaattgcccgat
gtcgagcgcgtctttgcccaggtcggttcgaccaccaccagcgggccgggcggcggcggc
agcggatcggatctacagaccggcacgctgaccgtggtgctcaagcgcgaccgctcgatg
acgacggaccagttccagcgttcaatcaccggcctgttgcgccagatccccgaagtgcgg
ctcaacaatcagggcggctttggcgcggcgggcgtcgaggtggtgctggcaggtcgtgat
ggtgatgcgctggcccgcgcccaagccgcgttgctgcgcgagatgcgggggatgaagacc
acattggacccgcgccccgcgccgccgccatcggcgcctgaactgattatccgccctctg
cccgatgcggcggcgcggctcaatgtctcgtctcaggcgattgcgcaggtggcccggatc
gccacgatcggcgatatcgacgccaatgtcgccaaattctcgacgctccagcaacgcctg
tcgatccgggtgcgtctgccccatgatgcgcgggtcgatctggaccagatcggcaatctt
caggtccccacgcttaacggcaagatgacgccgctgcgcacggtggccgacctgtcgatc
gcttccgggccgggccagatccagcgctatgatcgcgaacggcgcgtttcggttcaggcg
gatctcaacggcaccactatcggtcaggcgctcaatgaagtgtcgaagctggacgcgatg
aagcatctgcccgcaggcgtgcatgaggctaagaccggcgacagcgaggccatggccgac
ctgttcggtgggatcgtgggggccatggcctcgggcattctgatgatctatttcgtgctg
gtgatgctgttccacagcttcttcaagccgatcacgatcctttcggccctgccgctgacc
atgctgggtgcctttgtggcgctcaaagtcaccggcattgccatcacgctgccggtgctg
atcgggatgctgatgctgctgggtctggcggccaagaactcgatcctgttggtcgaattt
gcgatcgaggatgagcgcgcagggcaaccccagcgcgaggcgatcatgaacgcctgtcgc
gagcgtgcacgccccatcgtgatgaccacagtggccatggcggcgggcatgcttcccacc
gcgctgggcatcggcgagggttcgaccttccgccagcccatggcgattgcggtgatcggc
gggctgatcagctcgaccatgctctcgctggtgatggtgccggtggtctatgaattgatc
gatacgctggaaatgcggttgcgtccgcgtctggcgcgcctgatcactccgcgggcgccg
ggcgatgatgatcccatcgagccggggcaggttaccgtggtcagcgcaacgccggaccgg
gcctga
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