Niabella ginsenosidivorans: A8C56_20110
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Entry
A8C56_20110 CDS
T04418
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
A8C56_20110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nia01007
]
A8C56_20110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nia03016
]
A8C56_20110
Enzymes [BR:
nia01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
A8C56_20110
Amino acid related enzymes [BR:
nia01007
]
Aminoacyl-tRNA synthetase
Class I (U)
A8C56_20110
Transfer RNA biogenesis [BR:
nia03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
A8C56_20110
Prokaryotic type
Other AARSs
A8C56_20110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
DUF5052
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ANH82981
UniProt:
A0A1A9I8I0
LinkDB
All DBs
Position
complement(4741964..4745404)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSVKYREFTGLNLPSIEQEVLANWNAEQAFEKSVSLRNGAPSFVFYEGPPSANGMPGIHH
VISRTLKDLVCRYKTMQGFQVKRKGGWDTHGLPVELGVEKELGITKEDIGKKISVEEYNQ
KCREAVLRFKDKWDDLTRKMGYWVDLNDPYITFKNEYIETLWYLLKQLYNKGLLYKSVSI
QPYSPAAGTGLSSHELNQPGTYKDVKDTSATVLFKAVRNNKSEFLFKETTKVSPFGRDTE
GVEAEPAEVFFMAWTTTPWTLPSNLGLTVGGNIDYVLITTFNPYTHIPVNVIIAKPLVSK
YFKAEGENGDFENYTPLSGGRGAGGEVLPWKILATFKGDELAGIEYEQLLPFESNSLEKI
QEITPGATPFKVMVGDFVTTEDGTGIVHTAPAFGADDYKVGKKNNIGILTLVDRTGKFID
GTGEFSGRYVKDYKDEPGYVDVNVDISVKLKKENRAFKVEKYEHNYPHCWRTDKPILYYP
LDAWFIKTTALRNRMVELNKTIHWKPKSTGEGRFGNWLENMVDWNLSRSRFWGTPLPIWS
TEDGSEMKCIGSIGELNSEIRKASEVLGGEINKNYLHEGILDLHKPYVDEVVLVSDSGKP
MRREPDLIDVWFDSGAMPYAQWGLDYDKLKAGDPQPFNQPFDTNFPADFICEGVDQTRGW
FYTLHALAALLFDSVAYKTVVSNGLVLDKNGNKMSKRLGNVVDPFTTIETFGADATRWYL
ITNASPWDNLKFDIDGIKEVQRKFFGTLYNTYQFFALYANVDGFTFSEARIPLNERPEID
RWIISSLNTLVKDVTAAMDDYEPTQAGRLIEDFVDEHLSNWYVRLCRRRFWKGEYEADKI
SAYQTLFECLETVVRLMAPVAPFFSDAVFRNLNAVARHFDVESVHHALFPKADEAAIDKA
LEERMQLAQDISSLILSLRKKVNIKVRQPLQKVLIPVLNPSMKEQLEKVEELIKSEVNIK
ETEYLVDTEGFIKKKIKPNFVALGKKLGPKMKAVSNALADFGQEDISNLEKNGQTELDID
GEKITIQSNEVDISSEDIPGWTVANKGALTVALDITITEALKQEGDAREFINRIQKIRKD
SNFDVTDRISVQIDTNPTLKNSLNTYKDYICAEILADDLDFSPITSGGAEIEVNEHKLYT
IVTKKG
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaatacagagaatttacgggtttgaacctgccctccatagagcaggaagtg
ctggcaaactggaatgcagaacaggcttttgaaaaaagcgtttccctgcgcaacggggcg
ccgtcctttgttttttatgaaggccctcccagcgccaatggtatgccgggtattcaccat
gttatttcacgcacgctcaaagacctggtttgccgttataaaacgatgcagggcttccag
gtaaaacgcaaaggcggctgggatacccacgggctgccggtagagctgggagtggaaaag
gagctgggcattaccaaggaagacatcggcaaaaaaatatctgtagaggaatacaaccag
aaatgccgggaagcggtgctgcggtttaaggataagtgggatgatcttacccgtaaaatg
ggctattgggtagacctgaatgatccctatattacctttaaaaatgaatacatagaaacg
ctctggtatttactgaagcagttatataataaggggttattgtataaaagtgtaagcatt
cagccctattcccctgctgccggtaccgggttaagctcccacgagctgaaccagccgggt
acctataaagatgtaaaagataccagcgccaccgtgctgtttaaggccgtgcgtaataat
aaaagtgagttcctgtttaaagaaaccacaaaggtctccccctttgggagagatacagag
ggggttgaggccgagcctgccgaagtcttcttcatggcctggaccaccactccctggacg
ctgccctccaacctggggctgaccgttggaggcaatattgattatgtccttataacaacc
tttaatccttatacccacattccggtaaatgtgatcattgccaaacccctcgtcagcaaa
tattttaaggcagaaggggaaaatggtgattttgaaaattatacccccctctctggaggg
agaggggccgggggtgaggtgctgccctggaagatcctcgccacctttaaaggcgatgag
ctggcaggcattgaatatgagcagttattaccctttgaatccaactccctggagaaaata
caggaaattactcccggagccactccttttaaagtaatggtgggcgactttgtaacaact
gaagacggaacaggtattgtgcatactgcaccggcctttggcgcggatgactataaagta
ggtaagaaaaacaatatcggcattctcacgctggtagaccgtacggggaaatttattgac
ggtaccggtgagttcagcggccgttatgtgaaggattataaggatgagcccggttatgtg
gatgtaaacgtggatatttcagtaaagctgaaaaaagagaaccgtgcttttaaggtagaa
aaatatgagcacaattacccccactgctggcgtaccgataagccgatattatattacccg
ctggatgcctggttcatcaaaaccacagcattgcgcaaccggatggtggagctgaacaaa
accattcactggaaaccaaaatcaaccggtgaaggccgctttggcaactggctggagaat
atggtagactggaatctgagccgcagccgtttctggggcaccccattacccatctggtct
accgaagatggcagcgaaatgaaatgtatcggctctatcggggaactgaacagtgaaata
aggaaggccagcgaggttttgggcggtgaaatcaataagaattatctgcatgaaggcatc
ctggatctacataaaccctatgtagatgaagtggtactggtgagcgattccggcaaaccc
atgcgccgggaaccggatctgatcgatgtatggttcgacagtggtgccatgccctatgca
caatgggggctggactatgataagttaaaagccggtgatccgcagccgttcaaccagccg
tttgacaccaacttccccgctgactttatctgtgaaggtgtagaccagacccgcggatgg
ttttataccctgcatgcccttgcagcactgttgtttgatagcgtagcttacaaaacagta
gtaagcaatggcctggtgctggataaaaatggcaataaaatgagcaagcggctgggcaac
gtggtagatccctttactaccatcgaaacctttggcgcagatgcaacgcgttggtattta
attacaaacgcctctccatgggataacctgaaatttgatatcgacggtataaaggaagtg
cagcgaaaattctttggtaccctatacaatacttaccagttctttgcgctttatgcaaac
gtggacgggtttaccttcagcgaagcccggattccgctgaatgaacggccggaaattgac
cgctggatcatttcttctcttaacaccctggtaaaagatgttacggcggctatggatgat
tatgagcctacccaggccggccggctgatcgaagattttgtggatgagcacttaagtaac
tggtatgtaagactttgccgtcgaaggttttggaaaggagaatatgaagcagataaaatt
tcggcttaccagaccttatttgaatgcctggaaaccgttgtgcgcttaatggccccggta
gctcccttcttcagtgatgcggttttccgtaacctgaatgccgttgcccggcactttgac
gtggaatcagtacatcatgctctttttcccaaagcagatgaagcagccattgataaagcg
ctggaagaaaggatgcagctggctcaggatatttcttcattgatcctgtctttacgcaaa
aaagtgaacattaaggtgcgtcaaccgttacaaaaggtattaattcctgtgctgaaccct
tctatgaaagaacaactggaaaaggtggaggagctgatcaaatcggaagttaatattaag
gagacagaatacctggttgataccgaaggatttataaagaaaaaaatcaagcccaacttt
gtagcgttgggtaaaaagctgggccctaaaatgaaagcggtttcgaatgcactggctgat
ttcggtcaggaggatatcagcaatctggaaaagaacggacagacagaactggatattgac
ggcgaaaagataaccattcagagcaacgaggtggacatcagcagtgaagacatccccgga
tggacggtagccaacaaaggcgccctcaccgtggcgttagacattaccattacagaagcc
ctgaaacaggaaggcgacgcgcgggaatttataaaccgtattcaaaaaataaggaaggat
agcaattttgatgtaactgatcgtatttcagtacaaattgacacaaatcctacattaaaa
aattcgttaaacacgtataaagactatatttgcgcagaaattttggcagatgatctggat
tttagtccgattacatcaggtggcgctgaaattgaggtgaacgaacataagttatatacg
attgtaacaaaaaaagggtaa
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